GCGGCCGCTATACGACTCCTATCCGGAGAGGATCCGCGGAATTCACCTTG
TATACCTAATCATCGGGTGAGTGGATCAGGAGGGACTTTGGGAGGTTCTC
AGGCCGCAAGGCTGGCAGCCATGGGAGTAGGGATTGGTGCCCTCATAAAG
CAAGATCCAGAAGGACCTCCTGCCCCTTCCTGCACAGGGGGACACGGTGA
GACGCTAAGACCTTAACCTGAGTTTCTGGCCTCTGAGTTGAAAAAAAATT
TTTTTTCATTGTTTTTTAATCTCACCCAGAATGTGATACTGTTACAATGG
TTAGGAGGCACCAAGACATCTGCTCATCTCTGTTGCACCCCAAAGATGTA
TTCGTTAAACCCCCCCCACACACTAACATGCCCACTGGTTTACTCTCCTT
GTGCTGCCGTGGAAAGGCGAACCAGCTCGGCCGTATTACTACAGGACCTA
CTCTCTGGGACAACAAGAAGATAATGACAATCAGCTATTTCCTCTTGGAA
GCTGCCCCAGCATGTAGTCGCCTTGACACCTAGCGTGATATGTGTTCCAG
TAAATTTTCTGGAGCCCGCTTTTGTCATGTTTCTCATAGCTATCTCGGAT
TTTAATCTTTTTTTCCCTCACACATTTTTGTGTTTTCCCCCCGCCCTCTC
TATTTTCACCCGACTCATTCCCCCGTGTGTTCTATCTCCCT

TGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCTCCCAAGCTCATGGCTTGGCCCTGTTGTGC
GGTCATTCTGGTACTGAGAGCTAGCTTGTGCCTTGCGACATCACCCTGGT
GTTTCCATCTCAGCCAGCCTCTACAGCTGGTGTTCCTAGGAGAAAGAGAA
AAAGCTTACTGCTCTTGACCCCCGAGACTTCACCAGGACAGGCACCTTAG
ATACTTTGTTGCAATGCACTTGTGGCTCAGAGATCCTTCCCTTTCCTGGA
TGCTAAATGAATGAAATGAACAAAACTGAGAAAAAAGCTTCTGTCCTTTA
AGAATCTTCAAAATAGTTTCATCATATGTCTTAGTTAGGGTTTCTATTCC
TGGACAAAACATCATGACCAAGAAGCAAGATGGGGAGGAAAGGGTTTATT
CAGCTTACACTTCCACGTTGCTATCCATCACCAAAGGAAGTCAGGACTGG
AACTTAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGTAGGAT
GTTACTTGCTTCCTCTGGCTTGCTCAGCTTGCTTTCTTATAAAACCCAGG
ATCACCAGCCCAGGGATGGCACCACCCACAGTGGGCCCTCGATCCTTGAT
CACTAATTGAGAAAATGCCTTACAGCTGGATCTCATGGAGGCATTTCCTC
AAGGGAAGCTCCTT

Query= MSMg01no121_o12.b1 MSMg01no121_o12.b1 CHROMAT_FILE:
MSMg01no121_o12.b1 PHD_FILE: MSMg01no121_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:50 2005
         (290 letters)



>mm_chr18_84191336_84192025
          Length = 690

 Score =  514 bits (266), Expect = e-150
 Identities = 284/290 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcatcgggtgagtggatcaggagggactttgggaggttctcaggccgcaaggctggcagc 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 tcatcgggtgagtggatcaggagggactttgggaggttctcaggccgcaagggtggcagc 260

                                                                       
Query: 61  catgggagtagggattggtgccctcataaagcaagatccagaaggacctcctgccccttc 120
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 catgggagtagggattggtgccctcataaagcaagatccagaaggccctcctgccccttc 320

                                                                       
Query: 121 ctgcacagggggacacggtgagacgctaagaccttaacctgagtttctggcctctgagtt 180
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgcacagggggacacggtgagacactaagaccttaacctgagtttctggcctctgagtt 380

                                                                       
Query: 181 gaaaaaaaattttttttcattgttttttaatctcacccagaatgtgatactgttacaatg 240
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaaaaaaaatttttttcattgttttttaatctcacccagaatgtgatactgttacaatg 440

                                                             
Query: 241 gttaggaggcaccaagacatctgctcatctctgttgcaccccaaagatgt 290
           | |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 gctaggaggcaccaagacatctgctcatctctgttgtaccccaaagatgt 490


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space:   191361
Effective search space used:   191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no121_o12.g1 MSMg01no121_o12.g1 CHROMAT_FILE:
MSMg01no121_o12.g1 PHD_FILE: MSMg01no121_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:51 2005
         (558 letters)



>mm_chr18_84274280_84275237
          Length = 958

 Score =  944 bits (488), Expect = 0.0
 Identities = 500/504 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctcccaagctcatggcttggccctgttgtgcggtcattctggtactgagagctagcttgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctcccaagctcatggcttggccctgttgtgcggtcattctggtactgagagctagcttgt 445

                                                                       
Query: 61  gccttgcgacatcaccctggtgtttccatctcagccagcctctacagctggtgttcctag 120
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gccttgcgatatcaccctggtgtttccatctcagccagcctctacagctggtgttcctag 385

                                                                       
Query: 121 gagaaagagaaaaagcttactgctcttgacccccgagacttcaccaggacaggcacctta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gagaaagagaaaaagcttactgctcttgacccccgagacttcaccaggacaggcacctta 325

                                                                       
Query: 181 gatactttgttgcaatgcacttgtggctcagagatccttccctttcctggatgctaaatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gatactttgttgcaatgcacttgtggctcagagatccttccctttcctggatgctaaatg 265

                                                                       
Query: 241 aatgaaatgaacaaaactgagaaaaaagcttctgtcctttaagaatcttcaaaatagttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aatgaaatgaacaaaactgagaaaaaagcttctgtcctttaagaatcttcaaaatagttt 205

                                                                       
Query: 301 catcatatgtcttagttagggtttctattcctggacaaaacatcatgaccaagaagcaag 360
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 catcctatgtcttagttagggtttctattcctggacaaaacatcatgaccaagaagcaag 145

                                                                       
Query: 361 atggggaggaaagggtttattcagcttacacttccacgttgctatccatcaccaaaggaa 420
           |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 144 atggggaggaaagggtttattcggcttacacttccacattgctatccatcaccaaaggaa 85

                                                                       
Query: 421 gtcaggactggaacttaagcaggtcaggaagcaggagctgatgcagaggccatggtagga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84  gtcaggactggaacttaagcaggtcaggaagcaggagctgatgcagaggccatggtagga 25

                                   
Query: 481 tgttacttgcttcctctggcttgc 504
           ||||||||||||||||||||||||
Sbjct: 24  tgttacttgcttcctctggcttgc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space:   519504
Effective search space used:   519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)