Query= MSMg01no122_e03.b1 MSMg01no122_e03.b1 CHROMAT_FILE:
MSMg01no122_e03.b1 PHD_FILE: MSMg01no122_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:31 2005
(701 letters)
>mm_chr18_75042380_75043483
Length = 1104
Score = 1278 bits (661), Expect = 0.0
Identities = 690/701 (98%), Gaps = 3/701 (0%)
Strand = Plus / Plus
Query: 1 ttttccattctgcaaaatgaaacaaaatacagactcatgggtttattagagcagaagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttccattctgcaaaatgaaacaaaatacagactcatgggtttattagagcagaagaaa 260
Query: 61 aaaagaaaagctccctgatcttggtaataattatggcaaagattatccaatcgcttggtt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 aaaagaaaagctccctgatcttggtaataattatggcaaagattatccaatcgcttagtt 320
Query: 121 aatcagcatgaactattgatcacgaactgtatgccagggactgtagacaacagccctcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatcagcatgaactattgatcacgaactgtatgccagggactgtagacaacagccctcca 380
Query: 181 aggtcaatgctgttattcccatgccggggaagaagaggtttgggttaatcatttgctcaa 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggtcaatgccgttattcccatgccggggaagaagaggtttgggttaatcatttgctcaa 440
Query: 241 gggcccactgccgcaatggtgattctcatgtgtggtggcctcgcagccaatgttcttcgc 300
||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||
Sbjct: 441 gggcccactgccgcaatggtgattcacatgtgtgggggcctcacagccaatgttcttcgc 500
Query: 301 actgagagactctgtcccacgggttagggcaggaaaaacacacaggatttaggtgcatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actgagagactctgtcccacgggttagggcaggaaaaacacacaggatttaggtgcatat 560
Query: 361 ggtgggaacaattagaatacccggaatagaacctactcacacaggggcagttcagctcag 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggtgggaacaattagaatacccagaatagaacctactcacacaggggcagttcagctcag 620
Query: 421 ggaagcagg---tgagacctgctctggcctctcctgggctggcagagacaacagacacca 477
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 621 ggaagcaggagatgagacctgctctggcctctcctgggctggcaaagacaacagacacca 680
Query: 478 ggaggcagaagcctcctggggcccaggggagatgtgggtgcagttagggggtaggaagag 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggaggcagaagcctcctggggcccaggggagatgtgggtgcagttagggggtaggaagag 740
Query: 538 gaaactcttagggggtggggcagaggatggagggatacggcagttgcagaggacttggaa 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaaactcttagggggtggggcagaggatggagggatacggcagttgcagaggacttggaa 800
Query: 598 agtctctacaaatgtttgccttcctagaactaataatgcccctcccaagcccccacttga 657
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agtctctacaaaagtttgccttcctagaactaataatgcccctcccaagcccccacttga 860
Query: 658 cacatgatccagctggacctggttcatcttgatcccccccc 698
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 cacatgatccagctggacctggttcatcttgatcccccccc 901
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 701
Length of database: 1104
Length adjustment: 10
Effective length of query: 691
Effective length of database: 1094
Effective search space: 755954
Effective search space used: 755954
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no122_e03.g1 MSMg01no122_e03.g1 CHROMAT_FILE:
MSMg01no122_e03.g1 PHD_FILE: MSMg01no122_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:31 2005
(693 letters)
>mm_chr18_75174328_75175420
Length = 1093
Score = 1083 bits (560), Expect = 0.0
Identities = 620/652 (95%), Gaps = 22/652 (3%)
Strand = Plus / Minus
Query: 4 ttctagataaggagacttggtaagcgcagtctctttccccttga---tgggggtcaggta 60
|||| ||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 634 ttcttgataaggagacttggtaagcgcagtctctttcc---agaggttgggggtcaggta 578
Query: 61 gctgtaggtcttggagatgacatcaaaggtggccttggcaaagttgcccaggctggcagt 120
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 577 gctgtaggtcttggagatgacattaaaggtggccttggcaaagttgcccagggtggcagt 518
Query: 121 gcagccttggctcttctggcaggacattgatctgtgctttggtcctgttggtcggtattt 180
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 517 gcagccttggctcttcttgcaggacattgatctgtgctctggtcctgttggtcggtattt 458
Query: 181 gcttcacatacattgatgatctattattagatacgatcaacatagttttcttgtaatatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gcttcacatacattgatgatctattattagatacgatcaacatagttttcttgtaatatc 398
Query: 241 tgctgatgatcttcaaaataaagatttccttttggaagcagaggtagcagaattgagagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tgctgatgatcttcaaaataaagatttccttttggaagcagaggtagcagaattgagagt 338
Query: 301 tcaaagccaactgtggttagtgtcaaacaattgtaatttaagcatttgggaggtggagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tcaaagccaactgtggttagtgtcaaacaattgtaatttaagcatttgggaggtggagga 278
Query: 361 agaattgggagttcaaagttcaaattctcaggtagctacaaagccagtttaggctactta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 agaattgggagttcaaagttcaaattctcaggtagctacaaagccagtttaggctactta 218
Query: 421 agacccggtcacatgccgggcaaggtggcgcacacctttaatcccagcacttgggaggca 480
|||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||
Sbjct: 217 agacccggtcacatgccgggcatggtggggcacacctttaatcccagcactggggaggca 158
Query: 481 gaggcaggcggatttctgagctcgaggctagcctggtctacagagtgagttccaggacag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 gaggcaggcggatttctgagctcgaggctagcctggtctacagagtgagttccaggacag 98
Query: 541 ccagggctatacagagaaaccctgtctcaaaaaaa-caaaaaacaacaacaaaaagtgca 599
|||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 97 ccaggg---------------ctgtatcaaaaaaaccaaaaaacaacaacaaaaagtgca 53
Query: 600 ttctaagtttttattgtgcgaggactacccagttatccttcttccttactgc 651
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 ttctaagtttttattgtgcgaggactacccagttatccttcttccttactgc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1093
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1083
Effective search space: 739689
Effective search space used: 739689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
