Query= MSMg01no123_d21.b1 MSMg01no123_d21.b1 CHROMAT_FILE:
MSMg01no123_d21.b1 PHD_FILE: MSMg01no123_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:32:42 2005
(327 letters)
>mm_chr18_48162714_48163443
Length = 730
Score = 514 bits (266), Expect = e-150
Identities = 314/330 (95%), Gaps = 3/330 (0%)
Strand = Plus / Plus
Query: 1 gacttagtcctatagagttttctctcttatttttatacccaggagagactggaaattgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gacttagtcctatagagttttctctcttatttttatacccaggagagactggaaattgaa 260
Query: 61 tcatgatatatagggaaggctgccgtgtatatagtctctgtgatggggaagtttattgca 120
| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 ccgtgatatatagggaaggctgccatgtatatagtctctgtgatggggaagtttattgca 320
Query: 121 cactcccagaaactcttgaaaactgagcagtgaaaacatatcacagggtaaaggaatgag 180
|||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 cactcccagagactcttaaaaactgagcagtgaaaacatatcacagggaaaaggaatgag 380
Query: 181 ggctgggctggagaacagtcattaggaggaagagacaatagaaaagaaaggactggccca 240
||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 381 ggctgggctggagaacaatcattaggagaaagggacaatagaaaagaaaggactggccca 440
Query: 241 aataggagaactgtctta-ca-tacggagcttctaaaggattttat-tcttaactgtatt 297
|||||||||||||||||| | ||||||||||||||||||||||| || |||||||||
Sbjct: 441 aataggagaactgtcttatctgtacggagcttctaaaggattttaaatcaaaactgtatt 500
Query: 298 tgttgtaatcttttattttatataagttct 327
||||||||||||||||||||||||||||||
Sbjct: 501 tgttgtaatcttttattttatataagttct 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 730
Length adjustment: 9
Effective length of query: 318
Effective length of database: 721
Effective search space: 229278
Effective search space used: 229278
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no123_d21.g1 MSMg01no123_d21.g1 CHROMAT_FILE:
MSMg01no123_d21.g1 PHD_FILE: MSMg01no123_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:32:42 2005
(158 letters)
>mm_chr18_48286144_48286701
Length = 558
Score = 275 bits (142), Expect = 1e-78
Identities = 154/158 (97%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 1 ggggaagaaactattattcaacaaacaatatttgagagattgatttacacctaaagaaat 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gggg-agaaactattattcaacaaacaatatttgagagattgatttacacctaaagaaat 254
Query: 61 taatgaattattaccttacatcaggagaaacctaaatcaattccagataatatcaagggc 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 253 taatgaattattaccttacatcaggagaaacccaaatcaattccagataatataaagggc 194
Query: 121 tgaagagatggctaagtgattaagagcacggactgctc 158
|||||||||||||||||||||||||||||||| |||||
Sbjct: 193 tgaagagatggctaagtgattaagagcacggattgctc 156
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 158
Length of database: 558
Length adjustment: 8
Effective length of query: 150
Effective length of database: 550
Effective search space: 82500
Effective search space used: 82500
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
