Query= MSMg01no125_k08.b1 MSMg01no125_k08.b1 CHROMAT_FILE:
MSMg01no125_k08.b1 PHD_FILE: MSMg01no125_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:45 2005
(151 letters)
>mm_chr18_27561306_27561856
Length = 551
Score = 269 bits (139), Expect = 6e-77
Identities = 148/151 (98%)
Strand = Plus / Minus
Query: 1 aagataccttcctcgttctttatggcatctttcagatgctagttgtgtggcgggaatcat 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 351 aagataccttcctcgttctttatggcatctttcagatgctagttgtgtggtgggaatcat 292
Query: 61 ttttgaagtattttctctgaacacattttcttatctttacgtttatatcttacagtattg 120
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 291 ttttgaagtattttctctgaacacattttcttatctttatgtttatatctgacagtattg 232
Query: 121 ctcattggaatacgaaaatttgtcagtagtt 151
|||||||||||||||||||||||||||||||
Sbjct: 231 ctcattggaatacgaaaatttgtcagtagtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 151
Length of database: 551
Length adjustment: 8
Effective length of query: 143
Effective length of database: 543
Effective search space: 77649
Effective search space used: 77649
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no125_k08.g1 MSMg01no125_k08.g1 CHROMAT_FILE:
MSMg01no125_k08.g1 PHD_FILE: MSMg01no125_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:45 2005
(456 letters)
>mm_chr18_27408436_27409291
Length = 856
Score = 868 bits (449), Expect = 0.0
Identities = 455/457 (99%), Gaps = 2/457 (0%)
Strand = Plus / Plus
Query: 1 agtagggtatgttcatctcttaaaaccttttatccttttggagcacacacccaagttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtagggtatgttcatctcttaaaaccttttatccttttggagcacacacccaagttgat 260
Query: 61 tttcagtttctaaagtaagactgtgcaatcttttgtatgtcatgtgtatagcactataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttcagtttctaaagtaagactgtgcaatcttttgtatgtcatgtgtatagcactataaa 320
Query: 121 ctcctggtattaaattattggtgttatttttattattcttagttaatttggctgggctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcctggtattaaattattggtgttatttttattattcttagttaatttggctgggctta 380
Query: 181 attttataataggtgtagatgaattttcatagataggtaatggctctcattcttctacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attttataataggtgtagatgaattttcatagataggtaatggctctcattcttctacaa 440
Query: 241 gtatctttacttgctttcattgcatttttctcactggggattttagagtaaattattcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtatctttacttgctttcattgcatttttctcactggggattttagagtaaattattcta 500
Query: 301 gaactgaactacttggcctatgaaatagaaaccgagtctttaagacatgattaattacta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaactgaactacttggcctatgaaatagaaaccgagtctttaagacatgattaattacta 560
Query: 361 gaaaaaaaaaa-ctgaggtaaatctaacattaaaaatccttagttttttttttttttctg 419
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 561 gaaaaaaaaaaactgaggtaaatctaacattaaaaatccttagttttttttttttt-ctg 619
Query: 420 aagttgtatgaagcactgcaatggaaccattttatag 456
|||||||||||||||||||||||||||||||||||||
Sbjct: 620 aagttgtatgaagcactgcaatggaaccattttatag 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
