Query= MSMg01no126_l03.b1 MSMg01no126_l03.b1 CHROMAT_FILE:
MSMg01no126_l03.b1 PHD_FILE: MSMg01no126_l03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:11 2005
(407 letters)
>mm_chr18_26715845_26716650
Length = 806
Score = 725 bits (375), Expect = 0.0
Identities = 396/407 (97%), Gaps = 9/407 (2%)
Strand = Plus / Plus
Query: 5 ggaattcttctcaa----tacccacataattcattctgagtcccttctatggtgagagat 60
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcttctcaacagatac----ataattcattctgagtcccttctatggtgagagat 260
Query: 61 gaagatgcaattaaataaatgttataatttctgctctttgcgttatctttctaccagccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagatgcaattaaataaatgttataatttctgctctttgcgttatctttctaccagccc 320
Query: 121 aaatggacccctctcctcaagctgtctctatggctgtgcatgttgttccactttcccgag 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatggacccctctcctca-gctgtctctatggctgtgcatgttgttccactttcccgag 379
Query: 181 gaccttcatgcttttctgatctaagtcacattatttccacctttcacaggccagttttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gaccttcatgcttttctgatctaagtcacattatttccacctttcacaggccagttttga 439
Query: 241 aattgcagtcatcatttttattggcagcagttaacatttatgaagcacttaccgtgtgcc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 440 aattgcagtcatcatttttattggcagcagttaacatttatgaagcacttactgtgtgcc 499
Query: 301 aggcactgtgctgagcgcttcgcatttactgtcttgttttatcttcccatgagcacggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aggcactgtgctgagcgcttcgcatttactgtcttgttttatcttcccatgagcacggtg 559
Query: 361 aggaggaattcactgatccaatttcacatttgaggatgttcttttag 407
|||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 560 aggaggaattcattgatccaatttcacatttgaggatgttcttttag 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 806
Length adjustment: 9
Effective length of query: 398
Effective length of database: 797
Effective search space: 317206
Effective search space used: 317206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_l03.g1 MSMg01no126_l03.g1 CHROMAT_FILE:
MSMg01no126_l03.g1 PHD_FILE: MSMg01no126_l03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:11 2005
(345 letters)
>mm_chr18_26871472_26872217
Length = 746
Score = 638 bits (330), Expect = 0.0
Identities = 342/346 (98%), Gaps = 1/346 (0%)
Strand = Plus / Minus
Query: 1 tcatgcttgggcagtaatctcctccttgtttctttctcatccattgcaacattcatcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tcatgcttgggcagtaatctcctccttgtttctttctcatccattgcaacattcatcttg 487
Query: 61 tgagttcagaagctgtctctctttgaccttgttggacattaggattaaaatcctgtgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 486 tgagttcagaagctgtctctctttgaccttgttggacattaggattaaaattctgtgaaa 427
Query: 121 gacaaagtagcttggagagactcaaaggaactcaaaggagacattcaaagcatcgttgaa 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 426 gacaaagtagcttggagagactcaaaggaactcaaaggagacactcaaagcatcgttgaa 367
Query: 181 ggattcagaattgaagctcttggtgaggaggtaaaagattaaacatactatggaggttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ggattcagaattgaagctcttggtgaggaggtaaaagattaaacatactatggaggttag 307
Query: 241 attttcttagatttttaacaagttcacattcgtgttttacagggaaaaagaaaaaa-caa 299
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 306 attttcttagatttttaacaagttcacattcgtgttttacagggaaaaggaaaaaaacaa 247
Query: 300 caaagtacagataagagatgacaggttgacacttgccctctattac 345
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 caaagtacagataagagatgacaggttgacacttgccctctattac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 746
Length adjustment: 9
Effective length of query: 336
Effective length of database: 737
Effective search space: 247632
Effective search space used: 247632
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
