Query= MSMg01no126_o18.b1 MSMg01no126_o18.b1 CHROMAT_FILE:
MSMg01no126_o18.b1 PHD_FILE: MSMg01no126_o18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:29 2005
(249 letters)
>mm_chr18_81880471_81881118
Length = 648
Score = 451 bits (233), Expect = e-131
Identities = 245/249 (98%), Gaps = 1/249 (0%)
Strand = Plus / Plus
Query: 1 gcaaagggcaagtgtcaccagcttcagtttcatcttttattcagtgatgtaaaagaggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcaaagggcaagtgtcaccagcttcagtttcatcttttattcagtgatgtaaaagaggag 260
Query: 61 acccactttggcaggatttagggggaggaaaatgtgggcgggacagcttgtacaatttaa 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 acccactttggcaggatttagggagaggaaaatgtgggcgggacagcttgtacaatttaa 320
Query: 121 aacatgaagcatataaggtattatcaataaaaataaggggaaacatcctttcttcgcaaa 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacatgaagcatatagggtattatcaataaaaataaggggaaacatcctttcttcgcaaa 380
Query: 181 atccttatctcgggctatttgcctgtctagggaaaagagggcaattacagggaaaacaga 240
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttc-ttatctcgggctatttgcctgtctagggaaaagagggcaattacagggaaaacaga 439
Query: 241 taagggacc 249
|||||||||
Sbjct: 440 taagggacc 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 648
Length adjustment: 9
Effective length of query: 240
Effective length of database: 639
Effective search space: 153360
Effective search space used: 153360
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no126_o18.g1 MSMg01no126_o18.g1 CHROMAT_FILE:
MSMg01no126_o18.g1 PHD_FILE: MSMg01no126_o18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:29 2005
(146 letters)
>mm_chr18_82030994_82031539
Length = 546
Score = 263 bits (136), Expect = 3e-75
Identities = 142/144 (98%)
Strand = Plus / Minus
Query: 1 agtgcatttgctgttcggggagcttacatttgaaatgcaagcagcggggttagaatctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 agtgcatttgctgttcggggagcttacatttgaaatgcaagcagcggggttagaatctac 285
Query: 61 aagaggtagcactgacttctcttcttctgtctgtcctctgagtgtgaaggccaccaccag 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 284 aagaggtagcactgacttctcttcttctgtctgtcctctgagtgtgaaggccgccactag 225
Query: 121 cacagtgcatactttccagccttc 144
||||||||||||||||||||||||
Sbjct: 224 cacagtgcatactttccagccttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 146
Length of database: 546
Length adjustment: 8
Effective length of query: 138
Effective length of database: 538
Effective search space: 74244
Effective search space used: 74244
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
