Query= MSMg01no130_j19.b1 MSMg01no130_j19.b1 CHROMAT_FILE:
MSMg01no130_j19.b1 PHD_FILE: MSMg01no130_j19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:29 2005
(422 letters)
>mm_chr18_16434022_16434843
Length = 822
Score = 252 bits (130), Expect = 4e-71
Identities = 136/138 (98%)
Strand = Plus / Minus
Query: 1 attaagcaatattagaactattctgcttaagttccaaggaagaaaagatctaccatagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 attaagcaatattagaactattctgcttaagttccaaggaagaaaagatctaccatagga 279
Query: 61 gcttgtgttcaacatctataggtatgaaagccaacaaaatcactacttttatttaacttc 120
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gcttgtgctcaatatctataggtatgaaagccaacaaaatcactacttttatttaacttc 219
Query: 121 ccttagaaattacttcaa 138
||||||||||||||||||
Sbjct: 218 ccttagaaattacttcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no130_j19.g1 MSMg01no130_j19.g1 CHROMAT_FILE:
MSMg01no130_j19.g1 PHD_FILE: MSMg01no130_j19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:29 2005
(633 letters)
>mm_chr18_16367209_16368240
Length = 1032
Score = 1183 bits (612), Expect = 0.0
Identities = 628/634 (99%), Gaps = 3/634 (0%)
Strand = Plus / Plus
Query: 1 ttttcatctgcaagcatttaactgtgttgagttttaagacagaacacagtttagctactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttcatctgcaagcatttaactgtgttgagttttaagacagaacacagtttagctactt 260
Query: 61 agaagtcgatccatttattgaacagagaagtctcagtttgtccagcatccatttgttgac 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaagtcaatccatttattgaacagagaagtctcagtttgtccagcatccatttgttgac 320
Query: 121 caagggccagctctgcctatcctggttcaaagtatgtttcttctgattgataccaagtag 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caagggccagctctgcccatcctggttcaaagtatgtttcttctgattgataccaagtag 380
Query: 181 cattcagctgaaagcagttgtcacattgtgtgtcaccatggatgcagtgtcttcacagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cattcagctgaaagcagttgtcacattgtgtgtcaccatggatgcagtgtcttcacagag 440
Query: 241 ctgcacccacagatgtgaaatgtttaacaatgagcaatttgtttgaagttctttttattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgcacccacagatgtgaaatgtttaacaatgagcaatttgtttgaagttctttttattc 500
Query: 301 cacatatccttggaaaaatgaaaccatgggcagcatgaaaatctctaaagggcctttata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacatatccttggaaaaatgaaaccatgggcagcatgaaaatctctaaagggcctttata 560
Query: 361 cacagattaatgtggtaattctcttattactatgttctgaggaagtgctccttgcagcag 420
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 cacagattaatgtggtaattctctcattactatgttctgaggaagtgctccttgcagcag 620
Query: 421 cctctgtgcttcacccttagttataacatggctttgcattaagtgttttaataaaatgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cctctgtgcttcacccttagttataacatggctttgcattaagtgttttaataaaatgtg 680
Query: 481 aaattaaatgatcatccctggtgtgcctcagctcttggtcaaggcaagggggaaaa-tgt 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 681 aaattaaatgatcatccctggtgtgcctcagctcttggtcaaggcaagggggaaaaatgt 740
Query: 540 agcttatgaggtacataaaagtaccaaagagatttttttttttgtcttgaatgaagactt 599
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 741 agcttatgaggtacataaaagtaccaaagagattttttttt--gtcttgaatgaagactt 798
Query: 600 cattggtccatggaatgacatgattcccataggc 633
||||||||||||||||||||||||||||||||||
Sbjct: 799 cattggtccatggaatgacatgattcccataggc 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1032
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1022
Effective search space: 636706
Effective search space used: 636706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
