CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCCAAGCTCTATCCACTATTTGGCTGTGCATCCTTCTGACTCAGCT
GCTGGATGTAACCTCTCAGAGGATAGCCATGCTAGACTGCTGTCTGCAAG
CATAACAGTGTATCATTGATAGTGTCAGGGATTGATGCTTGCCCACGGGA
TAGGTCTCTATTGAGCTGGTTATTTGCTTGGCCATTTCATCAGGCTCTGC
TCTATCCTCCAACCCTGCATTTCTTATAAACAGGATAAATTTGGGGTTGA
AAGTTTTATAAGTGGGCTGGTATCCCTATTGTTACACTGAGGTTTCTGCC
TGGCTACAGGAAGTAGGCTATTCAGGTTCCATATCCCCACTGCAGTGAGT
CTCAGCAAGGGAAGTGAGTCATTCCACCACCCTTGAATCTTAGGAGTCTT
TTTTATCCCAGGTCTCTGGTAAGTCCTCCAGATGCACATACACACACACA
CACACATACACCAGCAGCCAGATTTTCATTGATTCTCGTGGCCATCTGGC
CATCTCTCCTGTCTTTTCCACAATTCTTTACAGATGGTTGAAAGAACAAT
TTTAAACTTCATATGGAAAATCAAAAAACCCAGGATAGGTAAAACAACCC
TGAACAGTATAAGAATTAGAGATATTACCATCGCTGATATCAAGCTGT

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTGGTTTCTTTAATAAAAGCCTCTCA
GTGATGTTCCTATATTTTTTCAGAGCAATAATGAAATTATATTGTAATAA
CATTTTCAGCCTTTTAAAAAAAACATATATAACCTGTTAATTCATGTATA
AATGGGCCAGCAGGTATAAATGCTTACGACTTGACTTGGTGTTTTGTGGA
CTTCTAATTTAAATAAGCATGAACTGCTCTACCATTCCCTGTCCATGTAA
TGTGGAAAATTAAGGACTTTCTTCTGATTTGCTTTGTAACTTAGAATTTT
TTTTTTAATACAAGTATTTCAAACTGGTTTTAAAAGTGACCTACTTTGGA
AATTCACTATTACTTTTTCACTGTCAAGAATGACACTTAGGGACACTGCA
ACTGACATCTTTGCATAAAAAAGGAAAGTGAGCTTAGAACGTACTATGAC
TGTCAAATTCAGAGCCGACATGATCATTTAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAATCAAAAATAACGAAAGGCAGTCAGTGTCA
TAAAATTTAATCATAAATTTCCAAGGGTTTCCTTTTTTTGGTGTATAGGA
ATAGTCATTATCCTTTGTTTACACTTAATGTGCTCAATTAGAAAAG

Query= MSMg01no132_j01.g1 MSMg01no132_j01.g1 CHROMAT_FILE:
MSMg01no132_j01.g1 PHD_FILE: MSMg01no132_j01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:07 2005
         (616 letters)



>mm_chr18_50730935_50731954
          Length = 1020

 Score = 1091 bits (564), Expect = 0.0
 Identities = 601/620 (96%), Gaps = 14/620 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctggtttctttaataaaagcctctcagtgatgttcctatattttttcagagcaataatga 60
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggtttctctaataaaagcctctcagtgatgttcctatattttttcagagcaataatga 260

                                                                       
Query: 61  aattatattgtaataacattttcagcctttt-aaaaaaaa-catatataacctgttaatt 118
           ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 261 aattatattgtaataacattttcagcctttttaaaaaaaatcatatataacctgttaatt 320

                                                                       
Query: 119 catgtataaatgggccagcaggtataaatgcttacgacttgacttggtgttttgtggact 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catgtataaatgggccagcaggtataaatgcttacgacttgacttggtgttttgtggact 380

                                                                       
Query: 179 tctaatttaaataagcatgaactgctctaccattccctgtccatgtaatgtggaaaatta 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctaatttaaataagcatgaactgctctaccattccctgtccatgtaatgtggaaaatta 440

                                                                       
Query: 239 aggactttcttctgatttgctttgtaacttagaatttttttttt--aatacaagtatttc 296
            |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 441 gggactttcttctgatttgctttgtaacttagaattttttttttttaatacaagtatttc 500

                                                                       
Query: 297 aaactggttttaaaagtgacctactttggaaattcactattactttttcactgtcaagaa 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaactggttttaaaagtgacctactttggaaattcactattactttttcactgtcaagaa 560

                                                                       
Query: 357 tgacacttagggacactgcaactgacatctttgcataaaaaaggaaagtgagcttagaac 416
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 tgacacttagggacactgcaactgacatctttgcataaaaaaggaaactgagcttagaac 620

                                                                       
Query: 417 gtactatgactgtcaaattcagagccgacatgatcatttagagagagagagagagagaga 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtactatgactgtcaaattcagagccgacatgatcatttagagagagagagagagagaga 680

                                                                       
Query: 477 gagagagagagagagagagaatcaaaaataacgaaaggcagtcagtgtcataaaatttaa 536
           ||||||||||          |||||||||||| |||||||||||||||||||||||||||
Sbjct: 681 gagagagaga----------atcaaaaataacaaaaggcagtcagtgtcataaaatttaa 730

                                                                       
Query: 537 tcataaatttccaagggtttcctttttttggtgtataggaatagtcattatcctttgttt 596
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tcataaatttccaagtgtttcctttttttggtgtataggaatagtcattatcctttgttt 790

                               
Query: 597 acacttaatgtgctcaatta 616
           ||||||||||||||||||||
Sbjct: 791 acacttaatgtgctcaatta 810


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1020
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1010
Effective search space:   612060
Effective search space used:   612060
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)