Query= MSMg01no133_h10.b1 MSMg01no133_h10.b1 CHROMAT_FILE:
MSMg01no133_h10.b1 PHD_FILE: MSMg01no133_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:17 2005
(292 letters)
>mm_chr18_64646203_64646894
Length = 692
Score = 387 bits (200), Expect = e-112
Identities = 284/346 (82%), Gaps = 54/346 (15%)
Strand = Plus / Minus
Query: 1 aaactgg--aaaaaaaacagttttaccttctatatttttttatcatttagaattaataac 58
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 aaactggaaaaaaaaaacagttttaccttctatatttttttatcatttagaattaataag 612
Query: 59 acgcttcttccagtggttatata------------------------------------- 81
| |||||||| ||||||||||||
Sbjct: 611 atgcttcttctagtggttatataacacacacacacacacacacacacacagaggcacaca 552
Query: 82 -------------acacacacacacagg--cacacacacacacaggtacacacacacact 126
||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 551 cacacacaggcacacacacacacacaggcacacacacacacacaggcacacacacacact 492
Query: 127 aagagttctgtattttcttcgtcaagaactctgtagatctatgcacatttttaaaactat 186
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 491 aagagttctgtattttcttcgtcaaggactctgtagatctatgcacatttttaaaactat 432
Query: 187 ctttctcgggatcacttttttattttactgtgtatattttgaaatatacaaaattgcagt 246
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 431 ctttctcaggatcacttttttattttactgtgtatattttgaaatatacaaaattgtagt 372
Query: 247 ttcttatgtatccgatggttttattatgctcagttccacctactta 292
|||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 371 ttcttatgtatctgatggttttattatgctcagttccacctactta 326
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 6
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no133_h10.g1 MSMg01no133_h10.g1 CHROMAT_FILE:
MSMg01no133_h10.g1 PHD_FILE: MSMg01no133_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:17 2005
(125 letters)
>mm_chr18_64493280_64493804
Length = 525
Score = 226 bits (117), Expect = 3e-64
Identities = 123/125 (98%)
Strand = Plus / Plus
Query: 1 gtgctttgtgccttttaatagtgttggctcgaaagataactcagaatgatctgatttttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtgctttgtgccttttaatagtgttggctcgaaagataactcagaatgatctgatttttt 260
Query: 61 ttaaaatttccttgagagcagggagtgaaaaagtctttaaaattgtacgattttaataaa 120
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttaatttccttgagagcagggagtgaaaaagtctttaaaattgtacgattttaataaa 320
Query: 121 cgaaa 125
|||||
Sbjct: 321 cgaaa 325
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 125
Length of database: 525
Length adjustment: 8
Effective length of query: 117
Effective length of database: 517
Effective search space: 60489
Effective search space used: 60489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
