Query= MSMg01no136_h17.b1 MSMg01no136_h17.b1 CHROMAT_FILE:
MSMg01no136_h17.b1 PHD_FILE: MSMg01no136_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:53 2005
(666 letters)
>mm_chr18_25179390_25180456
Length = 1067
Score = 1176 bits (608), Expect = 0.0
Identities = 650/664 (97%), Gaps = 1/664 (0%)
Strand = Plus / Plus
Query: 4 gaattctgcactccccccttttcctaattttgctagtacaatattaatacatatgggtaa 63
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctgcactcttcccttttcctaattttgctagtacaatattaatacatatgggtaa 263
Query: 64 ctgcctggtaattattcaaatatcattttatataagtagaagggaacagttttctttaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctgcctggtaattattcaaatatcattttatataagtagaagggaacagttttctttaca 323
Query: 124 acatagaaacttacccaatattcatatttatacccgggatacctaacataggtcgacagc 183
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 324 acatagaaacttacccaatattcatatttatacccaggatacctaacataggtcgacagc 383
Query: 184 ctttcagagagcttgctgtcatccactcaccccaataaagcctattctgtccttgttcag 243
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 384 ctttcagagagcttgctgtcatccactcacctcaataaagcctattctgtccttgttcag 443
Query: 244 tattagcagatggggcacctaacagatgccttaaattgtatagatatttctcccaaatga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tattagcagatggggcacctaacagatgccttaaattgtatagatatttctcccaaatga 503
Query: 304 tttgtatataaagcaagaatgcccacttcatcttccactattcaaaaatggttttgtact 363
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tttctttataaagcaagaatgcccacttcatcttccactattcaaaaatggttttgtact 563
Query: 364 tgagtacctttctgcactaactgattgttactgcagatggatgttttttacttggggagg 423
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgagtagttttctgcactaactgattgttactgcagatggatgttttttacttggggagg 623
Query: 424 tgttgttaagttacagtagtatatttcttgtacaacttcagggttcagggtatatttagc 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 624 tgttgttaagttacagtagtatatttcttgtacaacttcagggttcagggtatacttagc 683
Query: 484 aagacactgcacctgtcttgttctccatacacataaaagacttcacttaatactaggtc- 542
||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aagacgctacacctgtcttgttctccatacacataaaagacttcacttaatactaggtca 743
Query: 543 cccctcctgtttctaagtactatggactcctctataaattgacaaatggtggtttctttg 602
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 744 cccctcctgtttctaagtactatggactcctctataaattgacaaatggtgatttccttg 803
Query: 603 ctcttccctctttgggaaggcctgcaaagaagcatgtcagcatagagagaaggtagggat 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ctcttccctctttgggaaggcctgcaaagaagcatgtcagcatagagagaaggtagggat 863
Query: 663 aagc 666
||||
Sbjct: 864 aagc 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1067
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1057
Effective search space: 693392
Effective search space used: 693392
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_h17.g1 MSMg01no136_h17.g1 CHROMAT_FILE:
MSMg01no136_h17.g1 PHD_FILE: MSMg01no136_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:53 2005
(637 letters)
>mm_chr18_25355808_25356844
Length = 1037
Score = 663 bits (343), Expect = 0.0
Identities = 359/369 (97%), Gaps = 8/369 (2%)
Strand = Plus / Minus
Query: 268 gaaaggtaggatgcagaaagagagggagggagaaaaggaagggctgaagttttaaaaaaa 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 gaaaggtaggatgcagaaagagagggagggagaaaaggaagggctgaagttttaaaaaaa 978
Query: 328 tttcttctgagtgcattttaaatcctggataccaccatgaaaatcatgttttatagatta 387
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 977 tttcttctgagtgtattttaaatcctggataccaccatgaaaatcatgttttatatatta 918
Query: 388 aggcaaagtttaaactttcgttgaagctttagaaaaattaaagattttatctcaatataa 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 aggcaaagtttaaactttcgttgaagctttagaaaaattaaagattttatctcaatataa 858
Query: 448 gcaaagaagatatgttaagagattaatgtttgggctcaaaatatcttcagacagcaaggt 507
||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 857 gcaaagaagatatgttaagag--------ttgggctcaaaatatcttcagacagcaaggt 806
Query: 508 ctccaagaaatgtatcagtattttaagatgacatattttgttataatataatataacact 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ctccaagaaatgtatcagtattttaagatgacatattttgttataatataatataacact 746
Query: 568 gggcacccagagagaacacatttgaaatgtgctaatcgattgttttaaattcctcatcag 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gggcacccagagagaacacatttgaaatgtgctaatcgattgttttaaattcctcatcag 686
Query: 628 cttgttcag 636
|||||||||
Sbjct: 685 cttgttcag 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
