Query= MSMg01no137_c13.b1 MSMg01no137_c13.b1 CHROMAT_FILE:
MSMg01no137_c13.b1 PHD_FILE: MSMg01no137_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:45 2005
(582 letters)
>mm_chr18_62666948_62667933
Length = 986
Score = 1048 bits (542), Expect = 0.0
Identities = 572/584 (97%), Gaps = 6/584 (1%)
Strand = Plus / Plus
Query: 4 gaattctaattttac-tctaagaaactgagagataaaagttaaagaacttgctttatgtc 62
||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 204 gaattctaattttacatataagaaactgagagacaaaagttaaagaacttgctttatgtc 263
Query: 63 aaagcagaatctgaaccaggaagtctgtgatctgagcacatattcttagtcaacagtcaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aaagcagaatctgaaccaggaagtctgtgatctgagcacatattcttagtcaacagtcaa 323
Query: 123 cgtctcgcttgctgaatgagtactgtgtaaatgctaacgatacctaaagatctagaagaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cgtctcgcttgctgaatgagtactgtgtaaatgctaacgatacctaaagatctagaagaa 383
Query: 183 aagctttaaaaagcaatactgacaggacaatatggctcggttataaaaactccagagatt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aagctttaaaaagcaatactgacaggacaatatggctcggttataaaaactccagagatt 443
Query: 243 ttaaagaatcattactgagagttgaacaaaatggatcaatcaaacaaaca----ttagca 298
||||||||||||||||||||||||||||||| ||| ||| |||||||||| ||||||
Sbjct: 444 ttaaagaatcattactgagagttgaacaaaacggaccaaacaaacaaacaaacattagca 503
Query: 299 caatgtggatcttatcctaaaaagcagagcttgttacctgctgcattgggcgcaggtaga 358
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cgatgtggatcttatcctaaaaagcagagcttgttacctgctgcattgggcgcaggtaga 563
Query: 359 tgatccggttcctctccggaggcatcctcagtatttggtctagtacctggtccatattta 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgatccggttcctctccggaggcatcctcagtatttggtctagtacctggtccatattta 623
Query: 419 gtttcttgcactgtgcatagtcaaatcggtttacaattggtgcattttctacctttaaat 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gtttcttgcactgtgcatagtcaaatcggtttacaattggtgcattttctacctttaaat 683
Query: 479 tgcttcagtaccctgcacctggtagctataaaataaaacaataagctctataaataattt 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 -gcttcagtaccctgcacctggtagctataaaataaaacaataagctctataaataattt 742
Query: 539 atctaagagtgaaagcatattctggaagcatctctggaacaata 582
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 atctaagagtgaaagcatattctggaagcatctctggaacaata 786
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 986
Length adjustment: 10
Effective length of query: 572
Effective length of database: 976
Effective search space: 558272
Effective search space used: 558272
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_c13.g1 MSMg01no137_c13.g1 CHROMAT_FILE:
MSMg01no137_c13.g1 PHD_FILE: MSMg01no137_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:45 2005
(443 letters)
>mm_chr18_62752921_62753762
Length = 842
Score = 667 bits (345), Expect = 0.0
Identities = 418/447 (93%), Gaps = 9/447 (2%)
Strand = Plus / Minus
Query: 1 catacaacttcctattttaaaaaggtctatgaataggtaaaatgcactatcctatgtgat 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 catacaacttcctatttttaaaaggtctatgaataggtaaaatgcactatcctatgtgat 583
Query: 61 ttctaaaatactatgcacttttaatgcatctggcctttagtctcgggttcctatagactc 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 582 ttctaaaatactatgcacttttaatgcatctggcctttagtctcaggttcctatagactc 523
Query: 121 taagcatcagtagtcttaaataagatagccattggaattgattggttttccttttatcta 180
||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||
Sbjct: 522 taagcatcagtagtcttaaatgagatagccactgaaattgattgactttccttttatcta 463
Query: 181 aaatggggggtgcaggctgaaattagtggttcaaaatcccatggatgtggttagcttagg 240
||||| ||| ||||||||||||||||| ||||||||||||| || |||||||| |||||
Sbjct: 462 aaatgagggatgcaggctgaaattagtaattcaaaatcccatcgacgtggttagtttagg 403
Query: 241 tattttgtttggtctgcacagtgtttggaaggatagttattaggcaaatacc----acat 296
|||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 402 tattttgtttagtctgcacagtgtttggaaggatagttattaggcaaataccatttacat 343
Query: 297 ttttaaaatgtaaaatgcaacttagcattcttgctattgtataccaaatttaatttttat 356
||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 342 ttttaaaatgtaaaatgcaacttagcactcttgctatcatataccaaatttaatttttat 283
Query: 357 tattgctagctatcttttagcactgatacttatctcatgttgggacacttatctcatgtc 416
|||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 282 tattgctaactatcttttagcagtgatactt-----atgttgggacacttatctcatgtc 228
Query: 417 cagagttctctttattgtgattatctt 443
|||||||||||||||||||||||||||
Sbjct: 227 cagagttctctttattgtgattatctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 842
Length adjustment: 10
Effective length of query: 433
Effective length of database: 832
Effective search space: 360256
Effective search space used: 360256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
