XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCAAAGCCAGACTCATTTATATAATAAGACCTGTGTGAAGAAATAAAATT
AAAAAAAAATACAGAAAAACAATCACAGTCACAATGACAATTTAAATCGG
GTGTCTTAACATAGTTTGTGAGTGATGGGACAAGAGCTGACTCACAGTCT
TTATAGGTTATGACGCTAGATAATTGATGCTGCAGAAATTGTCCTGGTGA
AGGCCTTTTGTTTGCTCTGAGTAACCTGTGAGTCAGGTCAATTTGAGAGA
AGGCAGCGTGGGGGATTTTCCGGGAAGCTGCCAGCTCAGTACCCAGTGGC
AGATGCTGGGCATGAGGGCTGGGGAAGACTGAACAAATCCTTCCATTTCA
GTCATCCTCCAGTGCCCTTGCTGGGTGAGGAGACCCGAGGACACAGGGTG
GCTTAGCAGGTTCTAAAGACTCTGAGTTCCTATCCAGGCTTGATTTTCTT
CAAATCTTGGTAAATATTTTAAAAATTTTGAATTCTTTTTTTGCTCACTT
TTTTTTTTAAACTGCAATGTCTGTTTCTATGGAGGAATGTCTATTTATAG
ACTATTCCCTTATTTTTGCGGACAACACTGATAGTACTTATCTTAAGATG
TGCTGCTGACTTAGTTAATGACCCATGGATGCAATAAGATACCGAGAACT
CATCAGCATAGTGAGAGTTGATTGGTGGGGAATA

AGTGCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXACTCTCGAACCTGCGTACAAGTCTTGTTTACTAGT
TAGGCACAGCGGAGGCCCGCGCTATCTTATAATGGCGATTGCTCGCGGCA
CACACGGCTCTCCTCAGAGATTACTGGCGGCACACATACAATTGCTCGCA
GCACGTACCGGCTCTCCACACTTAACTACCATGATGGAAAAAAAAAATAT
CTGCCTAGATAATCAGGAATCAGAAAGCTGATTACCACAGAGACCCAGGA
TAAAACCAAACTGAACTGGCAAAGAAAATGTCAATGATTTCCAATGATAC
TCTTCTATACTCATAGATTGGTGCCTGGCACAGTCATTATCAGAGAGGTG
CCATCCACTAACTGATAGGAGTAGGTGTAGAGACCCACAGCCAAATACTA
ACTGGAGCTCGTGGAATCCTGCAAAAGAGAACAGAAAGGATTGTAAGGCC
AGTCAGGTCTAGGACACCACAAGAACATTTTCCACAGAATCAACTAAGCA
GTGATCATAGGGACTCATGGACACTAAAATGACAATCAAGGGTCATGTAT
GAATCTGGGCTAGATCCTCTGCATGTATGTTGTGGTTGTTTAGCTTGATG
TTCTTGTAGGAATTCTAACAGTGGCAATAGTGGTATCTATGACAATTTTA
CCTGATC

Query= MSMg01no137_j16.b1 MSMg01no137_j16.b1 CHROMAT_FILE:
MSMg01no137_j16.b1 PHD_FILE: MSMg01no137_j16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:21 2005
         (692 letters)



>mm_chr18_87186806_87187896
          Length = 1091

 Score = 1137 bits (588), Expect = 0.0
 Identities = 659/690 (95%), Gaps = 20/690 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaaagccagactcatttatataataagacctgtgtgaagaaataaaatt-aaaaa 63
           ||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 204 gaattcaaagccagatttatttatataataagacctgtgtgaagaaataaaattaaaaaa 263

                                                                       
Query: 64  aaaatacagaaaaacaatcacagtcacaatgacaatttaaatcgggtgtcttaacatagt 123
           ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 264 aaaatacagaaaaacaatcacagccacaatgacaatttaaatcaggtgtcttaacatagt 323

                                                                       
Query: 124 ttgtgagtgatgggacaagagctgactcacagtctttataggttatgacgctagataatt 183
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 324 ttgtgagtgatgggacaagagctgactcacagtctttataggttatgacgttagataatt 383

                                                                       
Query: 184 gatgctgcagaaattgtcctggtgaaggccttttgtttgctctgagtaacctgtgagtca 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gatgctgcagaaattgtcctggtgaaggccttttgtttgctctgagtaacctgtgagtca 443

                                                                       
Query: 244 ggtcaatttgagagaaggcagcgtgggggattttccgggaagctgccagctcagtaccca 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggtcaatttgagagaaggcagcgtgggggattttccgggaagctgccagctcagtaccca 503

                                                                       
Query: 304 gtggcagatgctgggcatgagggctggggaagactgaacaaatccttccatttcagtcat 363
           |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 504 gtggcagatgctgggcatgagggctggg-aagactgaacaaatcctcccatttcagtcat 562

                                                                       
Query: 364 cctccagtgcccttgctgggtgaggagacccgaggacacagggtggcttagcaggttcta 423
           |||||||||||||||||||||||||||||| ||||||||||| |  ||||          
Sbjct: 563 cctccagtgcccttgctgggtgaggagacctgaggacacagg-t--ctta---------- 609

                                                                       
Query: 424 aagactctgagttcctatccaggcttgattttcttcaaatcttggtaaatatttta-aaa 482
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 610 -agactc-gagttcctatccaggcttgattttcttcaaatcttggtaaatattttacaaa 667

                                                                       
Query: 483 attttgaattctttttttgctcacttttttttttaaactgcaatgtctgtttctatggag 542
           |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 668 attt-gaattctttttttgctcacttttttttttaa-ctgcaatgtctgtttctatggag 725

                                                                       
Query: 543 gaatgtctatttatagactattcccttatttttgcggacaacactgatagtacttatctt 602
           |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 726 gaatgtttatttatagactattcccttatttttgcggacaacacagatagtacttatctt 785

                                                                       
Query: 603 aagatgtgctgctgacttagttaatgacccatggatgcaataagataccgagaactcatc 662
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 aagatgtgcttctgacttagttaatgacccatggatgcaataagataccgagaactcatc 845

                                         
Query: 663 agcatagtgagagttgattggtggggaata 692
           ||||||||||||||||||||| ||||||||
Sbjct: 846 agcatagtgagagttgattgggggggaata 875


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1091
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1081
Effective search space:   737242
Effective search space used:   737242
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)