MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-138P09
Chromosome	18 (Build37)
Map Location	80,121,843 - 80,122,387
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Setbp1, LOC100039242, LOC100039250, LOC383311
Downstream gene	LOC433204, LOC545267, LOC100040632, LOC620963, LOC100040604, LOC620692, LOC100040593, LOC639825, Pard6g, Zfp508, LOC665009, LOC100039311, 1110032A13Rik, Txnl4, 1810005K13Rik, Pqlc1, Kcng2, D330025C20Rik, Ctdp1, LOC669389, LOC100039336, A430076E10Rik, LOC100039348, Nfatc1, Atp9b
Link	Open Mouse BAC browser

Click to get alignment info.

name	Setbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240427 MGI:1933199
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039242 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039242
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100039250 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039250
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC383311 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383311
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 Proteins pseudo : _no_value

name	LOC433204 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433204
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 115 ESTs

name	LOC545267 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545267
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 mRNAs, 471 ESTs, 43 Proteins pseudo : _no_value

name	LOC100040632 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040632
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 4 Proteins

name	LOC620963 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins

name	LOC100040604 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040604
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins

name	LOC620692 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620692
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins

name	LOC100040593 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040593
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins

name	LOC639825 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:639825
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins

name	Pard6g (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93737 MGI:2135606
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp508 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240442 MGI:2448562
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 103 ESTs, 5 Proteins

name	LOC665009 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665009
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 10 Proteins pseudo : _no_value

name	LOC100039311 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039311
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	1110032A13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68731 MGI:1915981
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Txnl4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27366 MGI:1351613
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 4 mRNAs

name	1810005K13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66255 MGI:1913505
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs, 1 Protein

name	Pqlc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66943 MGI:1914193
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcng2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240444 MGI:3694646
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 65 Proteins

name	D330025C20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665054 MGI:3588219
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Ctdp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67655 MGI:1926953
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC669389 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669389
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	LOC100039336 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039336
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	A430076E10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225770 MGI:3045375
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100039348 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039348
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Nfatc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18018 MGI:102469
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Atp9b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50771 MGI:1354757
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Setbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51890214 GeneID:240427 MGI:1933199
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SET binding protein 1 transcript_id : NM_053099.1

name	LOC433204 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270223 GeneID:433204
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 115 ESTs product : similar to zinc finger, DHHC domain containing 6 transcript_id : XM_001475540.1

name	LOC100040632 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270221 GeneID:100040632
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 4 Proteins product : similar to elongation factor 1 homolog (S. cerevisiae) transcript_id : XM_001475514.1

name	LOC620963 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270219 GeneID:620963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to elongation factor 1 homolog (S. cerevisiae) transcript_id : XM_001475493.1

name	LOC100040604 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270215 GeneID:100040604
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to elongation factor 1 homolog (S. cerevisiae) transcript_id : XM_001475452.1

name	LOC620692 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270211 GeneID:620692
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins product : similar to elongation factor 1 homolog (S. cerevisiae) transcript_id : XM_001475420.1

name	LOC100040593 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270213 GeneID:100040593
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins product : similar to elongation factor 1 homolog (S. cerevisiae) transcript_id : XM_001475436.1

name	LOC639825 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270217 GeneID:639825
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to elongation factor 1 homolog (S. cerevisiae) transcript_id : XM_001475469.1

name	Pard6g (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543459 GeneID:93737 MGI:2135606
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : par-6 partitioning defective 6 homolog gamma (C. elegans) transcript_id : NM_053117.2

name	Zfp508 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270202 GeneID:240442 MGI:2448562
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 103 ESTs, 5 Proteins product : zinc finger protein 508 transcript_id : XM_140497.7

name	1110032A13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40353223 GeneID:68731 MGI:1915981
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110032A13 gene transcript_id : NM_199197.1

name	Txnl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109255208 GeneID:27366 MGI:1351613
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thioredoxin-like 4 transcript_id : NM_025299.3

name	Txnl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109255211 GeneID:27366 MGI:1351613
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thioredoxin-like 4 transcript_id : NM_001038608.2

name	Txnl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109255209 GeneID:27366 MGI:1351613
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thioredoxin-like 4 transcript_id : NM_178604.3

name	Txnl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109255213 GeneID:27366 MGI:1351613
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thioredoxin-like 4 transcript_id : NM_001042408.1

name	1810005K13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94405072 GeneID:66255 MGI:1913505
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs, 1 Protein product : RIKEN cDNA 1810005K13 gene, transcript variant 1 transcript_id : XM_885191.2

name	Pqlc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382679 GeneID:66943 MGI:1914193
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PQ loop repeat containing 1 transcript_id : NM_025861.2

name	Kcng2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94405073 GeneID:240444 MGI:3694646
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 65 Proteins product : potassium voltage-gated channel, subfamily G, member 2 transcript_id : XM_140499.7

name	D330025C20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94405074 GeneID:665054 MGI:3588219
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : RIKEN cDNA D330025C20 gene transcript_id : XM_974210.1

name	Ctdp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328279 GeneID:67655 MGI:1926953
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 transcript_id : NM_026295.2

name	LOC669389 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270226 GeneID:669389
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical LOC669389 transcript_id : XM_001476012.1

name	LOC100039336 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270204 GeneID:100039336
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : similar to glutamine repeat protein 1 transcript_id : XM_001472711.1

name	Nfatc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38348192 GeneID:18018 MGI:102469
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 transcript_id : NM_198429.1

name	Nfatc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131200 GeneID:18018 MGI:102469
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 transcript_id : NM_016791.3

name	Atp9b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40807501 GeneID:50771 MGI:1354757
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, class II, type 9B transcript_id : NM_015805.2

name	Setbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51890215 CCDS:CCDS29362.1 GeneID:240427 MGI:1933199
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IDA] codon_start : 1 exception : mismatches in translation product : SET binding protein 1 protein_id : NP_444329.1

name	LOC433204 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270224 GeneID:433204
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475590.1

name	LOC100040632 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270222 GeneID:100040632
definition	codon_start : 1 product : similar to elongation factor 1 homolog (S. cerevisiae) protein_id : XP_001475564.1

name	LOC620963 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270220 GeneID:620963
definition	codon_start : 1 product : similar to elongation factor 1 homolog (S. cerevisiae) protein_id : XP_001475543.1

name	LOC100040604 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270216 GeneID:100040604
definition	codon_start : 1 product : similar to elongation factor 1 homolog (S. cerevisiae) protein_id : XP_001475502.1

name	LOC620692 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270212 GeneID:620692
definition	codon_start : 1 product : similar to elongation factor 1 homolog (S. cerevisiae) protein_id : XP_001475470.1

name	LOC100040593 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270214 GeneID:100040593
definition	codon_start : 1 product : similar to elongation factor 1 homolog (S. cerevisiae) protein_id : XP_001475486.1

name	LOC639825 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270218 GeneID:639825
definition	codon_start : 1 product : similar to elongation factor 1 homolog (S. cerevisiae) protein_id : XP_001475519.1

name	Pard6g (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543460 CCDS:CCDS29363.1 GeneID:93737 MGI:2135606
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA] codon_start : 1 exception : mismatches in translation note : partitioning-defective protein 6, alpha product : par-6 partitioning defective 6 homolog gamma protein_id : NP_444347.2

name	Zfp508 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270203 GeneID:240442 MGI:2448562
definition	codon_start : 1 product : zinc finger protein 508 protein_id : XP_140497.5

name	1110032A13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40353224 CCDS:CCDS29364.1 GeneID:68731 MGI:1915981
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] codon_start : 1 product : hypothetical protein LOC68731 protein_id : NP_954667.1

name	Txnl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384656 CCDS:CCDS29365.1 GeneID:27366 MGI:1351613
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005682 - snRNP U5 [Evidence TAS] [Evidence ISS]; GO:0005681 - spliceosome complex [Evidence ISS] [Evidence IEA] GO_function : GO:0008080 - N-acetyltransferase activity [Evidence IEA]; GO:0031202 - RNA splicing factor activity, transesterification mechanism [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA] [Evidence ISS]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0000245 - spliceosome assembly [Evidence ISS] codon_start : 1 note : isoform a is encoded by transcript variant 1; dim1 product : thioredoxin-like 4 isoform a protein_id : NP_079575.1

name	Txnl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109255212 GeneID:27366 MGI:1351613
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005682 - snRNP U5 [Evidence TAS] [Evidence ISS]; GO:0005681 - spliceosome complex [Evidence ISS] [Evidence IEA] GO_function : GO:0008080 - N-acetyltransferase activity [Evidence IEA]; GO:0031202 - RNA splicing factor activity, transesterification mechanism [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA] [Evidence ISS]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0000245 - spliceosome assembly [Evidence ISS] codon_start : 1 note : isoform b is encoded by transcript variant 3; dim1 product : thioredoxin-like 4 isoform b protein_id : NP_001033697.2

name	Txnl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109255214 GeneID:27366 MGI:1351613
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005682 - snRNP U5 [Evidence TAS] [Evidence ISS]; GO:0005681 - spliceosome complex [Evidence ISS] [Evidence IEA] GO_function : GO:0008080 - N-acetyltransferase activity [Evidence IEA]; GO:0031202 - RNA splicing factor activity, transesterification mechanism [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA] [Evidence ISS]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0000245 - spliceosome assembly [Evidence ISS] codon_start : 1 note : isoform b is encoded by transcript variant 4; dim1 product : thioredoxin-like 4 isoform b protein_id : NP_001035867.1

name	Txnl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109255210 GeneID:27366 MGI:1351613
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005682 - snRNP U5 [Evidence TAS] [Evidence ISS]; GO:0005681 - spliceosome complex [Evidence ISS] [Evidence IEA] GO_function : GO:0008080 - N-acetyltransferase activity [Evidence IEA]; GO:0031202 - RNA splicing factor activity, transesterification mechanism [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA] [Evidence ISS]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0000245 - spliceosome assembly [Evidence ISS] codon_start : 1 note : isoform b is encoded by transcript variant 2; dim1 product : thioredoxin-like 4 isoform b protein_id : NP_848719.2

name	1810005K13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82997532 GeneID:66255 MGI:1913505
definition	codon_start : 1 product : hypothetical protein LOC66255 isoform 1 protein_id : XP_890284.1

name	Pqlc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313218 CCDS:CCDS29367.1 GeneID:66943 MGI:1914193
definition	codon_start : 1 exception : mismatches in translation product : PQ loop repeat containing 1 protein_id : NP_080137.1

name	Kcng2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82997534 GeneID:240444 MGI:3694646
definition	codon_start : 1 product : similar to cardiac potassium channel subunit (Kv6.2) protein_id : XP_140499.6

name	D330025C20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94405075 GeneID:665054 MGI:3588219
definition	codon_start : 1 product : hypothetical protein LOC665054 protein_id : XP_979304.1

name	Ctdp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328280 CCDS:CCDS29368.1 GeneID:67655 MGI:1926953
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : CTD (carboxy-terminal domina, RNA polymerase II, polypeptide A) phosphatase, subunit 1 product : CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein_id : NP_080571.2

name	LOC669389 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270227 GeneID:669389
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476062.1

name	LOC100039336 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270205 GeneID:100039336
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472761.1

name	Nfatc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38348193 GeneID:18018 MGI:102469
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence IMP]; GO:0001837 - epithelial to mesenchymal transition [Evidence IMP]; GO:0000082 - G1/S transition of mitotic cell cycle [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; transcription factor NF-ATc; nuclear factor of activated T-cells, cytoplasmic 1 product : nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 isoform 2 protein_id : NP_940821.1

name	Nfatc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560459 CCDS:CCDS29369.1 GeneID:18018 MGI:102469
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence IMP]; GO:0001837 - epithelial to mesenchymal transition [Evidence IMP]; GO:0000082 - G1/S transition of mitotic cell cycle [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; transcription factor NF-ATc; nuclear factor of activated T-cells, cytoplasmic 1 product : nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 isoform 1 protein_id : NP_058071.2

name	Atp9b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40807502 CCDS:CCDS29370.1 GeneID:50771 MGI:1354757
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004012 - phospholipid-translocating ATPase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : ATPase, class 2, member b; ATPase 9B, p type; ATPase 9B, class II; macrophage MHC receptor product : ATPas, class II, type 9B protein_id : NP_056620.2

name	LOC100039242 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039242
definition	number : 5 pseudo : _no_value

name	LOC100039242 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039242
definition	number : 4 pseudo : _no_value

name	LOC100039242 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039242
definition	number : 3 pseudo : _no_value

name	LOC100039242 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039242
definition	number : 2 pseudo : _no_value

name	LOC100039242 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039242
definition	number : 1 pseudo : _no_value

name	LOC100039250 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039250
definition	number : 3 pseudo : _no_value

name	LOC100039250 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039250
definition	number : 2 pseudo : _no_value

name	LOC100039250 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039250
definition	number : 1 pseudo : _no_value

name	LOC383311 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383311
definition	number : 1 pseudo : _no_value

name	LOC100039311 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039311
definition	number : 2 pseudo : _no_value

name	LOC100039311 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039311
definition	number : 1 pseudo : _no_value

name	LOC100039348 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039348
definition	number : 3 pseudo : _no_value

name	LOC100039348 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039348
definition	number : 2 pseudo : _no_value

name	LOC100039348 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039348
definition	number : 1 pseudo : _no_value

name	LOC545267 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270210 GeneID:545267
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 mRNAs, 471 ESTs, 43 Proteins product : similar to Chain A, Human Adp-Ribosylation Factor 1 Complexed With Gdp, Full Length Non-Myristoylated pseudo : _no_value transcript_id : XR_032229.1

name	LOC665009 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270225 GeneID:665009
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 10 Proteins product : similar to Phosphoglycerate mutase 1 (brain) pseudo : _no_value transcript_id : XR_032298.1

name	A430076E10Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149270228 GeneID:225770 MGI:3045375
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA A430076E10 gene transcript_id : XR_035263.1

clone name	MSMg01-476B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212C16
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-138P09.T7 (MSMg01no138_p09.b1)	MSMg01-138P09.TJ (MSMg01no138_p09.g1)
ACC	AG344488	AG344489
length	758	711
length of high quality (start - end)	202 (56 - 257)	546 (81 - 626)
definition	CHROMAT_FILE: MSMg01no138_p09.b1 PHD_FILE: MSMg01no138_p09.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:56:10 2005	CHROMAT_FILE: MSMg01no138_p09.g1 PHD_FILE: MSMg01no138_p09.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:56:10 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	CCCCTTGCCATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXGCCGCGGAATTCCTCTAGGTTACCGTACAGGAGATGATTCCAGTCTT TCGACCACGGTCCATTTTCACGTCACAAGACTTGTCATGGTTGCAGAAAG GGCAGGTGAACTCGGTCTCCAGGGTGCCTGTCATCTTCTTGGGGGGCGGC TTTCGCTTGGACTTCCTTCGTCCCATTACTGCAGGCAGGGGGTGGGGGTG GGGGNTTNTNTNTTTTTTTTAATTTTTTTTTCACCATTACTTACACTTAT ATAATTTCCACACCTTCATCTTAAATCCATCTCTTTTTTTTCAACCATTT TTACCCTCCCTGTCAACTTCCGGCTTTTTTTTTTCCTCCCTCACTTTATT CCAGCCTACTTCCTTTAAACTCTTATATTTACTCCCCCCCTTTTCTTTAT ATCTCCCCTTTTTTTAACTCTCTCTCTCTTTTATTTTTCTCCCTTATCAT TTTTACTCTACTCTCCCCCCTCCCCACTTTCCTCTTTTGTCCCATCCTCC TTCCCCCTTTTTTTACTCTCCTCCCCCGCCTATCTCAAATTTTTTCACGC CTTCCTTCTTTGCACACTTTTTTCCTTTACTTACATTTCATTTCGCTCCT TTCATCTTCCCCCCCTTGTTTTGTCCGCCCCTTTCTTTTCCTTTTTCCGT CCGTCTATTTTTTTTTATTTTTCGCCTCCTTGTTTTTTCGCGCGCCTTTT TCTATTGT	CTCTTTTACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAAAAATAAAATCAGCAAA AACAATGAGGTTGGAGTTTAAGAGCACTCAGCTGATCTTACAGAGGACTC TAGTTTATTCCTAGCACCATGTGGTGGCTCATGACCACCTGTAACTCCAG GTCTAAGGATCTGATGCCCTCTATTTGCCTCCAAGGGGAACAAGCATACA GGTGGTACACAGACATACGTTCAGGCAAAACACACACCCAACATCACCAG ACGATGTATCTATAGCACAACTCTATTTATATTTAAGGCTTGGATAACAT CAAGGAAGGGCAGCTGAAAGATTGTGAGAGCCAGAAGAGCAGGAAGTCTG TTGTGATAGTGCATCTCCTGGAAATGTCAGAGGAGACCCCTATCTGGTGC CACAATTTCCACACAGGCAGAGCAAGTCAGAGATGAGCCCTATGAGGGCA GCCATGGTACTCCTGAGATGACCCCAGACACCCAGAGGCCCTGCTCACCA CTAAGATGAGCAATTAAGTGGAGGAGAGGCAGAAGAGGAAGAAAAGCAGG GTGGTGTGAAGGAGACAGAACTGGAGACTCTGGGGAATGAGAAGCAGCCT GATATGAGTAGCCAACAATGCCATCTAAGGCCATGGTAAGGTCCTGCCCC ATGCTGCCACA
quality values	Open. Hide. 8 10 8 8 10 8 9 8 10 8 7 10 8 8 8 18 21 24 24 28 15 13 11 9 10 19 34 33 33 33 42 42 48 48 39 27 20 20 19 13 21 11 12 10 10 9 9 9 11 11 11 11 9 11 11 17 18 30 30 31 31 31 33 33 33 59 50 33 33 26 20 8 6 6 6 6 7 9 15 21 30 30 33 33 33 31 31 36 36 36 36 36 36 35 37 37 37 50 57 57 57 57 57 53 53 57 68 68 68 68 47 47 51 51 51 51 42 42 41 41 41 42 50 50 50 50 51 50 50 68 57 57 57 47 47 48 48 50 68 68 68 68 68 57 57 57 57 57 59 57 57 57 54 54 57 57 57 68 68 57 68 68 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 50 50 50 50 50 51 68 68 68 57 57 59 59 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 59 57 57 48 48 48 57 48 48 48 48 46 59 59 47 34 23 20 3 0 3 3 0 3 0 3 0 3 8 13 23 24 28 15 10 10 6 6 6 8 8 19 15 10 8 8 8 8 8 8 8 8 10 10 9 9 9 8 8 6 6 8 8 12 10 11 11 13 11 12 12 12 12 15 10 9 9 9 10 8 8 8 8 8 14 14 10 8 8 8 8 10 11 10 8 8 8 8 9 8 9 10 11 9 8 12 6 6 6 6 8 8 9 15 12 9 9 10 8 10 12 8 8 10 8 8 10 8 8 8 8 9 8 11 9 8 8 8 8 12 7 8 8 9 11 12 13 11 11 11 11 11 9 8 8 10 8 8 8 8 8 10 10 11 10 10 10 10 8 8 8 11 8 8 8 8 8 8 8 9 10 9 8 8 8 8 8 8 8 10 9 9 9 10 10 10 10 10 15 15 16 18 12 12 10 10 10 8 8 8 10 12 8 8 8 10 10 15 12 12 10 10 10 24 18 19 15 13 13 8 8 6 6 8 8 10 10 10 8 8 8 10 12 12 15 8 8 6 6 8 10 10 10 9 6 8 8 10 11 9 8 8 8 8 8 8 8 8 8 8 8 13 17 8 8 8 10 10 8 10 10 10 10 12 11 11 13 8 8 8 10 10 8 10 12 12 8 8 8 8 8 8 10 11 11 8 8 8 8 8 8 10 13 10 11 14 15 8 8 10 8 8 8 13 13 22 11 10 9 8 8 10 8 10 10 11 11 14 15 18 24 12 13 10 12 10 8 8 6 6 6 6 8 6 6 11 11 16 11 11 9 7 11 8 9 9 10 10 10 10 10 10 10 9 13 10 10 10 10 11 11 12 10 9 10 10 9 9 13 12 13 8 8 8 11 8 12 13 10 8 10 12 12 10 10 10 8 8 8 8 8 8 8 8 15 10 8 8 6 6 8 8 10 14 16 15 14 11 12 11 13 9 9 9 13 13 12 10 9 8 8 8 8 8 8 10 10 8 8 8 8 12 18 10 10 10 10 13 12 16 8 8 6 6 8 8 8 8 10 12 10 9 6 10 8 8 8 12 13 10 8 8 8 8 8 8 10 8 6 6 8 6 6 11 13 7 7 8 8 12 12 8 8 8 8 8 8 8 6 8 6 6 6 6 8 8 8 8 8 9 11 11 11	Open. Hide. 6 6 6 8 7 7 6 6 6 9 10 11 10 10 9 8 7 7 6 6 8 14 14 28 30 30 41 42 33 33 33 33 33 42 59 33 27 15 9 9 9 6 6 6 6 6 10 12 10 19 15 22 29 27 23 11 11 12 26 21 36 36 33 33 37 29 15 19 14 15 11 16 12 11 11 21 21 33 33 33 33 33 36 36 50 57 57 57 57 50 36 36 35 35 35 31 31 31 50 42 41 21 19 8 6 6 8 21 21 37 37 37 39 44 44 53 53 53 53 57 57 57 53 53 53 50 50 50 50 50 50 53 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 59 59 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 59 68 57 57 57 57 57 57 59 57 57 57 57 57 68 59 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 50 48 48 59 59 59 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 54 59 59 59 57 57 57 57 57 57 68 68 68 68 68 68 68 68 57 59 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 50 59 59 59 59 59 59 59 59 59 44 41 41 34 34 23 23 11 11 11 18 18 31 36 59 37 39 37 41 47 47 59 59 59 59 59 59 59 57 50 50 50 50 50 50 50 57 57 57 57 57 57 57 54 57 59 68 68 57 57 48 48 48 48 59 59 68 59 59 59 57 57 57 48 48 57 57 48 57 57 57 57 59 59 57 57 48 48 48 48 46 50 59 59 47 44 43 41 41 44 44 44 47 47 50 41 41 40 40 39 39 39 41 37 37 41 59 44 47 46 47 42 48 41 50 41 41 37 37 37 36 36 43 41 41 41 46 46 47 48 59 59 50 57 57 39 39 35 39 39 43 47 59 59 47 50 47 47 39 39 39 34 34 41 41 39 39 40 40 41 41 43 41 39 34 31 35 32 37 37 31 29 27 22 24 24 32 37 37 28 18 14 14 14 15 15 30 32 37 37 37 32 29 29 32 37 28 30 28 30 28 30 39 39 30 21 21 11 11 15 19 29 17 11 8 8 8 11 16 22 26 14 26 21 30 30 37 23 21 12 14 22 23 23 28 30 33 33 28 25 13 10 8 8 8 8 10 30 26 30 22 20 18 19 23 19 28 23 18 14 20 14 19 16 14 9 9 9 9 10 16 20 17 17 17 30 31 32 24 24 33 24 22 12 12 11 13 11 10 10 10 10 10

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no138_p09.g1 MSMg01no138_p09.g1 CHROMAT_FILE:
MSMg01no138_p09.g1 PHD_FILE: MSMg01no138_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:10 2005
         (546 letters)



>mm_chr18_80121642_80122587
          Length = 946

 Score = 1009 bits (522), Expect = 0.0
 Identities = 540/546 (98%), Gaps = 1/546 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcaaaaataaaatcagcaaaaacaatgaggttggagtttaagagcactcagctgatctta 60
           ||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 202 tcaaaaataaaattagcaaaaacaa-gaggttggagtttaagagtactcagctgatctta 260

                                                                       
Query: 61  cagaggactctagtttattcctagcaccatgtggtggctcatgaccacctgtaactccag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagaggactctagtttattcctagcaccatgtggtggctcatgaccacctgtaactccag 320

                                                                       
Query: 121 gtctaaggatctgatgccctctatttgcctccaaggggaacaagcatacaggtggtacac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtctaaggatctgatgccctctatttgcctccaaggggaacaagcatacaggtggtacac 380

                                                                       
Query: 181 agacatacgttcaggcaaaacacacacccaacatcaccagacgatgtatctatagcacaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agacatacgttcaggcaaaacacacacccaacatcaccagacgatgtatctatagcacaa 440

                                                                       
Query: 241 ctctatttatatttaaggcttggataacatcaaggaagggcagctgaaagattgtgagag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctctatttatatttaaggcttggataacatcaaggaagggcagctgaaagattgtgagag 500

                                                                       
Query: 301 ccagaagagcaggaagtctgttgtgatagtgcatctcctggaaatgtcagaggagacccc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccagaagagcaggaagtctgttgtgatagtgcatctcctggaaatgtcagaggagacccc 560

                                                                       
Query: 361 tatctggtgccacaatttccacacaggcagagcaagtcagagatgagccctatgagggca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatctggtgccacaatttccacacaggcagagcaagtcagagatgagccctatgagggca 620

                                                                       
Query: 421 gccatggtactcctgagatgaccccagacacccagaggccctgctcaccactaagatgag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gccatggtactcctgagatgaccccagacacccagaggccctgctcaccactaagatgag 680

                                                                       
Query: 481 caattaagtggaggagaggcagaagaggaagaaaagcagggtggtgtgaaggagacagaa 540
           |||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 681 caattaagtggaggagagtcagaagaggaagaaaagcagggtgatgtgaaggagatagaa 740

                 
Query: 541 ctggag 546
           ||||||
Sbjct: 741 ctggag 746


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space:   501696
Effective search space used:   501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information