TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTTCTGCTCTGAGCCCCATTTTTTAATGCGGTTATTTGATTTT
CTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCT
ATCTGATTTATGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTTT
TTGTCTTATTTACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATT
AGGTCCCATTTGTCAATTCTCATTCTTACAGCACAAGCCATTGCTCTTCT
GTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTT
TCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATC
CACTTAGATTTGACCTTAGTGCAAGGAGATAAGTATGGATCGATTCCCAT
TCTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGC
TGTCTTTATTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGA
CCATAGGTGTGTGGGTTCATTTCTGGGTCTTCACTTCTATTCCATTGGTC
TACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGCTC
TGTAGTAAAGCTTTAGGTCAGTCATGGTGATTCCACCAGAGGTTCTTTTA
TCCTTGAGAATAGTTTTTGCTC

GATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCCGTGGACCACAGGATCCTCTGGGCCTTGTG
TACTTTGTATGCATAACACTGCACATTTTCTTCTCTGAGTATTTCTCCCA
GGAGAGCCTGGTTGGTCCGTATTCTACTAAATGATTAATAATTTCTGTTC
ACAAGCTTCCAGAGTAAATGTTCAAGAGTGGTTGGTGAAGGACTGCTCTT
TCTGAAAGAACGACTGGCTTGACAAAACATGCAAATGTACTGATTTCCCT
CCAGTTGCTCTATATTGAGCCTCACAGTGTTTGCTTCTTCAGTGATGCTT
CCTTTTAAACCATCCACACAATTGTAATATATAGTAATAGTCTTTCGTCT
TTTAAAACTTTTTTTAAATTAAAATAAAATGCCATTATATTCTTTCTTCT
TTTTTATCTTGGCAAAGTCTTATCCATCTTTTTTCTCTTGCTATCTGTGC
ACTTGTTACCATGGTCTTATTCCCTTTGAACTTAAGAGATTTATCATTTT
ACCTTACATATTTACATTTATAATTCACTTAGGGATATTTTTTACATATC
ACACAAAATTTTCAAGCATTTTCTTCCTTATGTGGTGAATACTAGCTTCC
TTTTTCAATTGGTCATATGTGGTAAATAATTAATTGAATTTTGCATATTA
ATCATACCCTCTGCAGCN

Query= MSMg01no139_o18.g1 MSMg01no139_o18.g1 CHROMAT_FILE:
MSMg01no139_o18.g1 PHD_FILE: MSMg01no139_o18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:28 2005
         (649 letters)



>mm_chr18_88658081_88659129
          Length = 1049

 Score = 1214 bits (628), Expect = 0.0
 Identities = 643/648 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccgtggaccacaggatcctctgggccttgtgtactttgtatgcataacactgcacatttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccgtggaccacaggatcctctgggccttgtgtactttgtatgcataacactgcacatttt 260

                                                                       
Query: 61  cttctctgagtatttctcccaggagagcctggttggtccgtattctactaaatgattaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttctctgagtatttctcccaggagagcctggttggtccgtattctactaaatgattaat 320

                                                                       
Query: 121 aatttctgttcacaagcttccagagtaaatgttcaagagtggttggtgaaggactgctct 180
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatttctattcacaagcttccagagtaaatgttcaagagtggttggtgaaggactgctct 380

                                                                       
Query: 181 ttctgaaagaacgactggcttgacaaaacatgcaaatgtactgatttccctccagttgct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctgaaagaacgactggcttgacaaaacatgcaaatgtactgatttccctccagttgct 440

                                                                       
Query: 241 ctatattgagcctcacagtgtttgcttcttcagtgatgcttccttttaaaccatccacac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 ctatattgagcctcacagtgtttgcttcttcagtgatgcttccttttaagccatccacac 500

                                                                       
Query: 301 aattgtaatatatagtaatagtctttcgtcttttaaaactttttttaaattaaaataaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aattgtaatatatagtaatagtctttcgtcttttaaaactttttttaaattaaaataaaa 560

                                                                       
Query: 361 tgccattatattctttcttcttttttatcttggcaaagtcttatccatcttttttctctt 420
           |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||
Sbjct: 561 tgccattatattctttcttcttttttatcttggtgaagtcttatccatcttttttctctt 620

                                                                       
Query: 421 gctatctgtgcacttgttaccatggtcttattccctttgaacttaagagatttatcattt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gctatctgtgcacttgttaccatggtcttattccctttgaacttaagagatttatcattt 680

                                                                       
Query: 481 taccttacatatttacatttataattcacttagggatattttttacatatcacacaaaat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taccttacatatttacatttataattcacttagggatattttttacatatcacacaaaat 740

                                                                       
Query: 541 tttcaagcattttcttccttatgtggtgaatactagcttcctttttcaattggtcatatg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttcaagcattttcttccttatgtggtgaatactagcttcctttttcaattggtcatatg 800

                                                           
Query: 601 tggtaaataattaattgaattttgcatattaatcataccctctgcagc 648
           |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 801 tggtaaataactaattgaattttgcatattaatcataccctctgcagc 848


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space:   663921
Effective search space used:   663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)