Query= MSMg01no143_b10.b1 MSMg01no143_b10.b1 CHROMAT_FILE:
MSMg01no143_b10.b1 PHD_FILE: MSMg01no143_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:32 2005
(636 letters)
>mm_chr18_81817049_81818084
Length = 1036
Score = 1065 bits (551), Expect = 0.0
Identities = 607/633 (95%), Gaps = 13/633 (2%)
Strand = Plus / Plus
Query: 4 ggaattcctatacaacccaggttgaccacagactaccgggcagccccatgcctcattctc 63
||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 217 ggaattcctatacaacccaggctgaccacagactacagggcaaccccatgcctcattctc 276
Query: 64 tggaatatttaggcacatttcactacccttagcgttctggttagtttgtgtgtcaacgtg 123
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 277 tggaatatttaggcacatttcactacccttagtgttctggttagtttgtgtgtcaacgtg 336
Query: 124 acacaaacttgagtcactgggaaaaatggaaacgtgattagggaatcacttctatcagat 183
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 337 acacaaacttgagtcactgggagaaatggaaacgtgattagggaatcacttctatcagat 396
Query: 184 tggcccatgggtgtatctgtgaagcattttcctgattaatgactgatttaggagggctca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tggcccatgggtgtatctgtgaagcattttcctgattaatgactgatttaggagggctca 456
Query: 244 acccacggtgggctgtactccccctgggctggtggtcctgcaccatctaacacaggaagc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 acccacggtgggctgtactccccctgggctggtggtcctgcaccatctaacacaggaagc 516
Query: 304 tgagcaaggcacagaggcaggccatacacaagcactctcccatagcctcggcttcatctc 363
|||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 517 tgagcaaggcacagaggcaggccatacaca-gcactctcccatagc------------tc 563
Query: 364 ctgccccacctcttgtcctgatttccctcagtgctgaactgtgatggggctgtgtaatcc 423
||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 564 ctgccttagttcttgtcctgatttccctcagtgctggactgtgatggggctgtgtaatcc 623
Query: 424 aaataacgctttttctcaccaagcgagttgttgtcagtgttattgcaggaacagagaaac 483
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aaataatgctttttctcaccaagcgagttgttgtcagtgttattgcaggaacagagaaac 683
Query: 484 aagccaggaaacccagcaatgaacacacttctctcaaggccctgtttaaatgacgagcag 543
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aagccaggaaacccagctatgaacacacttctctcaaggccctgtttaaatgacgagcag 743
Query: 544 ggatcagaaatttttttttgccccagcaaaacgctttgcagacatgaacatttgaagcat 603
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 744 ggatcagaaatttttttttgccccagcaaaacactttgcagacatgaacatttgaagcat 803
Query: 604 gtatgtgcctttctcctttgcagattctgaaaa 636
|||||||||||||||||||||||||||||||||
Sbjct: 804 gtatgtgcctttctcctttgcagattctgaaaa 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_b10.g1 MSMg01no143_b10.g1 CHROMAT_FILE:
MSMg01no143_b10.g1 PHD_FILE: MSMg01no143_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:32 2005
(297 letters)
>mm_chr18_81906353_81907049
Length = 697
Score = 482 bits (249), Expect = e-140
Identities = 288/307 (93%), Gaps = 10/307 (3%)
Strand = Plus / Minus
Query: 1 actgctcacagagagccagagttcagtggtgcctagcagcaccattcccactgaatccct 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 569 actgctcacagagagccagagttcagtggtgcctagcagcaccgttcccactgaatccct 510
Query: 61 gg----------ctacatgactacaggagcaggcaagcacatgatgggtaagtgaacccc 110
|| ||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 509 ggctagggaagactacatgactacaggagcaggcacgctcatgatgggtaagtgaacccc 450
Query: 111 aggagagatagagatgctcttctccttctctgcccggtgtgttcaacttaactccagtca 170
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 449 aggagagatagagatgctctcctccttctctgccccgtgtgttcaacttaactccagtca 390
Query: 171 gaacacattgcagagctgaaacacactgagtgaagcaaccatcagaggctgcccagccca 230
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gaacacatcgcagaactgaaacacactgagtgaagcaaccatcagaggctgcccagccca 330
Query: 231 catagtgccctgccgtgctggcttgggtcacagcacttgaccagcaagaagtctaggaca 290
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 catagtgccccaccgtgctggcttgggtcacagcacttgaccagcaagaagtctaggaca 270
Query: 291 agctgag 297
|||||||
Sbjct: 269 agctgag 263
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
