TCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTCAGCTGAGCCATACATAATGGCTGAGAATCACCTAAAGAAATGTTCT
ACATCCTTAGTCATCAGGGAAATGCAAATCACAACCATCCTGAGATTCCA
CCTCACACCAATCAGAATGGCTAAGATCAAAAACTCAGGTGACAGCAGAT
GCTGGTGAGGATGTGAAGAAAGAGGAATACTCCTCCTTTGCTGGTGGGAT
TGCAAGCTGGTGCAACTGCTCTGCAAATCAGTTTGGCTGTTCCACAGAAA
ATTTGACATAGTACTATCTGAAGACCCAGCAATACCTCTCCTGGGCATAT
ACCCAGAAGATGCTCTAACATGTAATAAGGACACATGCTTCACTATGTTC
ATAGCAGCCTTGTTCACAATAGCCAGAAGCTGGAAAGAACCCAGATGTCC
TTCAACAGAGGATATGGAAAATATGGCTCATTTTTTACACAATGGAGTAC
TCAGCTATTAAAAACAATTAATTCATCAAATTCTTAGGCAAATGTATGGA
ACTAAAAATATCATTCTCAGTGAGGTAACCCAGCCAAAAAAGAGCACACC
TGTTATGTACTCACTGATAAATGGATGCTCAGAATACCCAATATACTACC
CACAGTCCATATGGATGCTCATGAATAATGATAACCACGTATGGATACTT
CCGC

CAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTCACTATAGCTAAGATGTATAAAGTG
TATTTTCTTACATGAATGAATAAAAATATTTGACATATTTTAAATATCAT
TGTTTTCCTTCTATTTTTTTTAAATTATTATTATGTCATTCCTCTCCTCT
TCTTTCTTACTTGCAAATCTTCCCACATACCACTCCTTGCTTGCTTTCAA
ATTCATGGCTTCTCTTTCTTTTAATTGTTGCAATATTCATATAAAATTCA
TAAGCATAATGAAATAGCACTCCATATGGACAGTCTAGCAACAACATGTA
TAAACATGTAAGACATGAAAGTGGAACCAACAGGCATCTGAAAATAAATA
CTATATGAGATCAATTGACTGTGTGGTAGTTTGAATAAGAATAGTACTCA
CAAGCTCCTTTACCTAAATATTTGCTCCTCCGTTGGTACAAATTTTTGTG
AAGGGCTAGGGGCTATTGTTTTGTAGGCTTTAAAGTTTTAAAACCTACAC
TTTTCCCAGTTAATTCATTCTTCCTCCTGTCTGTGGATGTTAGAAGCTCT
CAATTACTGCTCTGCCATCATGCCTGCTTGCCTGATGCCCTGTCTTTTTG
CCATGAAGAGTATGGACTGCAACCCTCTGGATCCATGAAATCCCAATAAA
AAAT

Query= MSMg01no145_l06.g1 MSMg01no145_l06.g1 CHROMAT_FILE:
MSMg01no145_l06.g1 PHD_FILE: MSMg01no145_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:52 2005
         (483 letters)



>mm_chr18_90400988_90401870
          Length = 883

 Score =  880 bits (455), Expect = 0.0
 Identities = 476/483 (98%), Gaps = 1/483 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctcactatagctaagatgtataaagtgtattttcttacatgaatgaataaaaatatttga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ctcactatagctaagatgtataaagtgtattttcttacatgaatgaataaaaatatttga 261

                                                                       
Query: 61  catattttaaatatcattgttttccttctattttttttaaattattattatgtcattcct 120
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 262 catattttaaatatcattgttttccttctatttttttt-aattattattatgtcattcct 320

                                                                       
Query: 121 ctcctcttctttcttacttgcaaatcttcccacataccactccttgcttgctttcaaatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcctcttctttcttacttgcaaatcttcccacataccactccttgcttgctttcaaatt 380

                                                                       
Query: 181 catggcttctctttcttttaattgttgcaatattcatataaaattcataagcataatgaa 240
           |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||
Sbjct: 381 catggcttctctttcttttaattgttgcaatattcatatataattcataaacataattaa 440

                                                                       
Query: 241 atagcactccatatggacagtctagcaacaacatgtataaacatgtaagacatgaaagtg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atagcactccatatggacagtctagcaacaacatgtataaacatgtaagacatgaaagtg 500

                                                                       
Query: 301 gaaccaacaggcatctgaaaataaatactatatgagatcaattgactgtgtggtagtttg 360
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 gaaccaacaggcatctgaaaataaatactatatgagatcaattgattgtgtggtagtttg 560

                                                                       
Query: 361 aataagaatagtactcacaagctcctttacctaaatatttgctcctccgttggtacaaat 420
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 561 aataagaatagtactcacaagctcctttacctaaatatttgctcctccattggtacaaat 620

                                                                       
Query: 421 ttttgtgaagggctaggggctattgttttgtaggctttaaagttttaaaacctacacttt 480
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 621 ttttgtgaagggctaggggctattgttttgtaggctttaaggttttaaaacctacacttt 680

              
Query: 481 tcc 483
           |||
Sbjct: 681 tcc 683


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 883
Length adjustment: 10
Effective length of query: 473
Effective length of database: 873
Effective search space:   412929
Effective search space used:   412929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)