Query= MSMg01no148_h20.b1 MSMg01no148_h20.b1 CHROMAT_FILE:
MSMg01no148_h20.b1 PHD_FILE: MSMg01no148_h20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:24 2005
(639 letters)
>mm_chr18_22250035_22251073
Length = 1039
Score = 1089 bits (563), Expect = 0.0
Identities = 582/589 (98%), Gaps = 2/589 (0%)
Strand = Plus / Minus
Query: 1 gcctagattgcccccagtttaatcactaacatagatttttctccagcctctgccattctt 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 589 gcctagattgcccccagtttaatcactgacatagatttttctccagcctctgccattctt 530
Query: 61 agtccttaatatatgcaaacatggctctccatttctcttctacaaataatatcaaataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 agtccttaatatatgcaaacatggctctccatttctcttctacaaataatatcaaataaa 470
Query: 121 ttaaataccattgaactgattaagaagtttctaattttatgatcaattttttaaatgtaa 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tttaataccattgaactgattaagaagtttctaattttatgatcaattttttaaatgtaa 410
Query: 181 aattaggctattagttccttattcttattttataagttatcatatattttcaatactttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 aattaggctattagttccttattcttattttataagttatcatatattttcaatactttc 350
Query: 241 atatacctatataatacatttttaatttttgctatagtcacatcttttctaccctaccct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 atatacctatataatacatttttaatttttgctatagtcacatcttttctaccctaccct 290
Query: 301 cctctttcagctcccacctctccatgtccatagactcagcctcaggatcacgacttcttc 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 289 cctctttcagctcccacctctccatgtccatagactcagcctcaggatcatgacttcttc 230
Query: 361 cataagcacatatatatgatatacattatacatacacacacaca--catgcacgcacaca 418
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 229 cataagcacatatatatgatatacattatacatacacacacacacgcatgcacacacaca 170
Query: 419 cacatcacatataaagcttgctaatacataagttaatgctgctcggtgtttgttagggct 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 cacatcacatataaagcttgctaatacataagttaatgctgctcggtgtttgttagggct 110
Query: 479 gactacttaggtttggctcatctacagagaagattgattctgcctctatcactagcttat 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 gactacttaggtttggctcatctacagagaagattgattctgcctctatcactagcttat 50
Query: 539 agttctttatctaagggtcatacttttccaccatccatgttagcatgcc 587
||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 agttcttcatctaagggtcatacttttccaccatccatgttagcatgcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_h20.g1 MSMg01no148_h20.g1 CHROMAT_FILE:
MSMg01no148_h20.g1 PHD_FILE: MSMg01no148_h20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:24 2005
(344 letters)
>mm_chr18_22109627_22110370
Length = 744
Score = 650 bits (336), Expect = 0.0
Identities = 342/344 (99%)
Strand = Plus / Plus
Query: 1 cctaaaaaccgttctaaaggacaaaagctttgctggtgttatttgccagacagactgtag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 cctaaaaaccgttctaaaggacaaaagctttgctggtgttatttgccagacagactttag 260
Query: 61 ccaactacttattcatgtagttgtaaagagagaagagcctatggaaaatgtttgaaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaactacttattcatgtagttgtaaagagagaagagcctatggaaaatgtttgaaattt 320
Query: 121 acggatcaaaatttgtatgtaatagattataatgaaaaagaatgtaatattttttagtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acggatcaaaatttgtatgtaatagattataatgaaaaagaatgtaatattttttagtct 380
Query: 181 atgagaacatgcaaatttattattttgatttctgtacataggtagttttaaaaatattcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgagaacatgcaaatttattattttgatttctgtacataggtagttttaaaaatattcc 440
Query: 241 taacatgcttaggatctacttttaaaaatgtgttatgagacttcataattggacgccaag 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 taacatgcttaggatctacttttaaaaatgtgttatgagacttcataattagacgccaag 500
Query: 301 gtaactttttaaaagttttactaagagactagccagaatctgct 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtaactttttaaaagttttactaagagactagccagaatctgct 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
