Query= MSMg01no148_m12.b1 MSMg01no148_m12.b1 CHROMAT_FILE:
MSMg01no148_m12.b1 PHD_FILE: MSMg01no148_m12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:47 2005
(368 letters)
>mm_chr18_75208969_75209736
Length = 768
Score = 681 bits (352), Expect = 0.0
Identities = 361/364 (99%), Gaps = 1/364 (0%)
Strand = Plus / Minus
Query: 5 gaattctaggccatccttgtctatagagtgagtttcaggacagccagcgctactcagcaa 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 gaattctaggccagccttgtctatagagtgagtttcaggacagccagcgctactcagcaa 595
Query: 65 aacctgtctc-aaatacaaaaactaaatatatctaggtcataattacaatcgcacaaaac 123
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 aacctgtctcaaaatacaaaaactaaatatatctaggtcataattacaatcgcacaaaac 535
Query: 124 aatgtgaatgattagaaattaaaaccaatctaaatatgacaaggaaaatggcagctgaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 aatgtgaatgattagaaattaaaaccaatctaaatatgacaaggaaaatggcagctgaaa 475
Query: 184 catgactgactgctatggaactatgagccccagtgtattcagacagcaaacctggaaagt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 catgactgactgctatggaactatgagccccagtgtattcagacagcaaacctggaaagt 415
Query: 244 acatatgttctttcactcacagctcccagtaattcagactggctgtattttactttttag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 acatatgttctttcactcacagctcccagtaattcagactggctgtattttactttttag 355
Query: 304 gcacaccagtttcatactcgaatggtaaaagatgacgatttcatagttcacaccttttag 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 354 gcacaccagtttcatactcgaatggtaaaagatgacgatttcatagttcacaccttctag 295
Query: 364 agaa 367
||||
Sbjct: 294 agaa 291
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_m12.g1 MSMg01no148_m12.g1 CHROMAT_FILE:
MSMg01no148_m12.g1 PHD_FILE: MSMg01no148_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:47 2005
(339 letters)
>mm_chr18_75054248_75054986
Length = 739
Score = 580 bits (300), Expect = e-170
Identities = 330/340 (97%), Gaps = 2/340 (0%)
Strand = Plus / Plus
Query: 1 ttttctttaggattacccaccagcggcaatcttctttgcattggcctttgcagatgttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttctttaggattacccaccagcggcaatcttctttgcattggcctttgcagatgttcc 260
Query: 61 ccctgacatcccatgatcatagagaaacctggagtgaccaggcagtcccgggaagctagc 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 ccctgacatcccatgatcatagagaaacctggagcgaccaggcagtcccgggaagctagc 320
Query: 121 ctgtaccagtgtaggggtactactgagtacccagggcccttcccttgtcctctttgaccc 180
||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 ctgcaccagtgtaggggtactactgagtacccagggctcttcccttgtcctctttgaccc 380
Query: 181 aactgtgataatagactctgctcacgtgaggcttccatttcctgacaatgggcaaagtag 240
| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 agctgtgataatagactctgctcacgtgaggcttccgtttcctgacaatgggcaaagtag 440
Query: 241 tcgataaaggctgggagcaatgggattcaagaggga-ccagcagaagtgtgtcttcatca 299
|| ||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 441 tcaataaaagctgggagcaatgggattcaagagg-agccagcagaagtgtgtcttcatca 499
Query: 300 cagggcacttgtagaacatagacaatagagctactaaata 339
||||| ||||||||||||||||||||||||||||||||||
Sbjct: 500 cagggtacttgtagaacatagacaatagagctactaaata 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
