Query= MSMg01no151_m06.b1 MSMg01no151_m06.b1 CHROMAT_FILE:
MSMg01no151_m06.b1 PHD_FILE: MSMg01no151_m06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:40 2005
(339 letters)
>mm_chr18_49167687_49168425
Length = 739
Score = 627 bits (324), Expect = 0.0
Identities = 333/336 (99%)
Strand = Plus / Plus
Query: 4 gaactccttttgtatgtgtctatagtcctggaacaatcatgataaaattagaaactataa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaactccttttgtatgtgtctatagtcctggaacaatcatgataaaattagaaactataa 263
Query: 64 aggaaacttcacaagtttcagagcactctagaaaagctaaaattgtcaaccttacagaga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aggaaacttcacaagtttcagagcactctagaaaagctaaaattgtcaaccttacagaga 323
Query: 124 agtgaatccactgaaagtggtagccacatcaagacaccatttcatctcatccaagcactt 183
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agtgaacccactgaaagtggtagccacatcaagacaccatttcatctcatccaagcactt 383
Query: 184 agtttatacaagagattgagatgagtaaaattttttgattctgattcagcttaccttata 243
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 384 agtttatacaagagattgagatgagtaacattttttgattctgattcagctcaccttata 443
Query: 244 agaagcctggcaatacacctttccctaaaaagcccttcagtgttcactgctgtgccttaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agaagcctggcaatacacctttccctaaaaagcccttcagtgttcactgctgtgccttaa 503
Query: 304 gtatatcattcaaaattatcaaattcaagtaatgac 339
||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtatatcattcaaaattatcaaattcaagtaatgac 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_m06.g1 MSMg01no151_m06.g1 CHROMAT_FILE:
MSMg01no151_m06.g1 PHD_FILE: MSMg01no151_m06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:40 2005
(234 letters)
>mm_chr18_49333380_49334011
Length = 632
Score = 166 bits (86), Expect = 8e-46
Identities = 105/112 (93%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 121 ttctaaaaatcagatgtgtaatctcctatctgtagctaaaattctattaaatgtatgaca 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 430 ttctaaaaatcagatgtgtaatctcctatctgtagccaaaattctattaaatgtaagaca 371
Query: 181 gaaaaacatattgagtttaatcgtatcttgtttttttattgtttgtttgttt 232
||||||||| |||||||||| ||||||| |||||||||||||||||||||
Sbjct: 370 caaaaacata--gagtttaatcatatcttgattttttattgtttgtttgttt 321
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 632
Length adjustment: 9
Effective length of query: 225
Effective length of database: 623
Effective search space: 140175
Effective search space used: 140175
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
