Query= MSMg01no151_n01.b1 MSMg01no151_n01.b1 CHROMAT_FILE:
MSMg01no151_n01.b1 PHD_FILE: MSMg01no151_n01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:44 2005
(597 letters)
>mm_chr18_27297670_27298666
Length = 997
Score = 1036 bits (536), Expect = 0.0
Identities = 578/596 (96%), Gaps = 8/596 (1%)
Strand = Plus / Plus
Query: 9 tctctccttcctgtttttttgtttgtttgttt-------ttttgtttatttttggttttg 61
|||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 202 tctctccttcatgtttttttgtttgtttgtttgtttgttttttgtttatttttggttttg 261
Query: 62 ttttgatagacccaagagcaaaataactcagcagtggtgacttgacactcagatgttagt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttttgatagacccaagagcaaaataactcagcagtggtgacttgacactcagatgttagt 321
Query: 122 ttcaaatattgtttttgatagaagatgcaaagtttcccctagaaaacctaattcacggaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttcaaatattgtttttgatagaagatgcaaagtttcccctagaaaacctaattcacggaa 381
Query: 182 tgagatgatggctaatttataaggaaagtctgaaacattcagaagtcatagaacataaga 241
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 382 tgagatgatggctaatttgtaagaaaagtctgaaacattcagaagtcatagaacataaga 441
Query: 242 aactgtccctaaacaaagaaattgaaacaagactatacaatgctggacatatgcctacag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aactgtccctaaacaaagaaattgaaacaagactatacaatgctggacatatgcctacag 501
Query: 302 tcttaattggagtttctattgctgtgaagagacaccatgaccacagcagctcttataaag 361
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 502 tcttaattggagtttctattgctgtgaagagataccatgaccacagcagctcttataaag 561
Query: 362 gaaaacatttacaccgcccctggcttattgcttcagagcttcagtccattatgattacag 421
||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gaaaacattta-agtgggcctggcttattgcttcagagcttcagtccattatgattacag 620
Query: 422 caggacaccgagtggagtgcaggtggatgtggtgctagagaagtagctgagagtttcata 481
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 621 caggacaccgagtggagtgcaggtggatgtggtgctagagaagtagctgagaatttcata 680
Query: 482 tgtagatcaacaggcaccaggaaatgggaacaactggacctggcttgaacttctgaaacc 541
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtggatcaacaggcaccaggaaatgggaacaactggacctggcttgaacttctgaaacc 740
Query: 542 tcatagcagaatctcagtgacatagtaccttgtccacacctactccaatgacactc 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcatagcagaatctcagtgacatagtaccttgtccacacctactccaatgacactc 796
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_n01.g1 MSMg01no151_n01.g1 CHROMAT_FILE:
MSMg01no151_n01.g1 PHD_FILE: MSMg01no151_n01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:44 2005
(344 letters)
>mm_chr18_27450983_27451726
Length = 744
Score = 658 bits (340), Expect = 0.0
Identities = 343/344 (99%)
Strand = Plus / Minus
Query: 1 tgtgttctaactctacatgatgtaaaagcataactaggaagaataaaaggcaagaaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tgtgttctaactctacatgatgtaaaagcataactaggaagaataaaaggcaagaaaaac 485
Query: 61 tcccttggggagagttattctgactgtttttattttttctgctttcctcatctaaacatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tcccttggggagagttattctgactgtttttattttttctgctttcctcatctaaacatg 425
Query: 121 ttttctcaccaacttaacattttagatgatcatttttattatttatgatattttgctgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ttttctcaccaacttaacattttagatgatcatttttattatttatgatattttgctgtg 365
Query: 181 attttccccactacattgtaaaatatacatgtttggggaactgctgcttaaccttagttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 attttccccactacattgtaaaatatacatgtttggggaactgctgcttaaccttagttc 305
Query: 241 atcatttacagtttgatgcattaccagttcagcacatacagatgcaactaattaaacaaa 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 304 atcatttacagtttgatgcattaccagttcagcacatactgatgcaactaattaaacaaa 245
Query: 301 agtaaactcatatgaagtttcattattattataattgatttgta 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 agtaaactcatatgaagtttcattattattataattgatttgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
