Query= MSMg01no155_m20.b1 MSMg01no155_m20.b1 CHROMAT_FILE:
MSMg01no155_m20.b1 PHD_FILE: MSMg01no155_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:47 2005
(686 letters)
>mm_chr18_4745389_4746474
Length = 1086
Score = 1203 bits (622), Expect = 0.0
Identities = 667/682 (97%), Gaps = 1/682 (0%)
Strand = Plus / Plus
Query: 5 gaattctgtccccattcaaggagttcaagtcctgttcctcagtgtctggaaatattactc 64
|||||||||||||| | |||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 206 gaattctgtccccagtgaaggtgttcaagtcctgttcttcagtgtctggaaatattactc 265
Query: 65 tgcctagaagaaagttgtttgcagatgtaatcaaataaaggcaagggcatagtggcttag 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tgcctagaagaaagctgtttgcagatgtaatcaaataaaggcaagggcatagtggcttag 325
Query: 125 gtgggtcctaaagtaatgactggtgtctgcctttatgtatgtagatacgtgtagacatgg 184
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gtgggtcctaa-gtaatgactggtgtctgcctttatgtatgtagatacgtgtagacatgg 384
Query: 185 ggacttctttctcccatcatagtatgcaaatgcttgagaaagtcaatttacaagaaagaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggacttctttctcccatcatagtatgcaaatgcttgagaaagtcaatttacaagaaagaa 444
Query: 245 agatttgttttggctcttggcttcaacgttttcagtccctgttcagacatcctgtcatgt 304
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 445 agatttgttttggctctgggcttcaatgttttcagtccctgttcagacatcctgtcatgt 504
Query: 305 tagatctgtggtgaagcagagcattgttgctaagtgcataaaacagaaaggtacttacct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tagatctgtggtgaagcagagcattgttgctaagtgcataaaacagaaaggtacttacct 564
Query: 365 tccaatagccttcactacaaagaaaggtgaagaaaggacactggggttccacatcccctt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tccaatagccttcactacaaagaaaggtgaagaaaggacactggggttccacatcccctt 624
Query: 425 tctaggtccccagtgacctatcttcctcttactgggtcccatctcttaaagattccaaca 484
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 625 tctaggtccccagtgacctatcttactcttactgggtcccatctcttaaagattccaaca 684
Query: 485 ctcaataatacaacaaactaaagaatgagtctttataggggacccaaatcacagtgacat 544
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 685 ctcaataatacaacaaactaaagaatgagtctttatagggaacccaaatcacagtgacat 744
Query: 545 gcacaaaagagacacagggagcaagaatggatgccaggggcagggaaaggagtgatgggg 604
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gcacaaaagaggcacagggagcaagaatggatgccaggggcagggaaaggagtgatgggg 804
Query: 605 gacaggaaggatgtgcctattagctgaagagtgccaggatctaccagaagctggaaaatg 664
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 805 cacaggaaggatgtgcctattagctgaagagtgccaggatctaccagaaactggaaaatg 864
Query: 665 gcatggatggacaggagtggcc 686
||| |||||||||||||||||
Sbjct: 865 gcacagatggacaggagtggcc 886
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1086
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1076
Effective search space: 727376
Effective search space used: 727376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_m20.g1 MSMg01no155_m20.g1 CHROMAT_FILE:
MSMg01no155_m20.g1 PHD_FILE: MSMg01no155_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:47 2005
(382 letters)
>mm_chr18_4763152_4763933
Length = 782
Score = 638 bits (330), Expect = 0.0
Identities = 369/382 (96%)
Strand = Plus / Minus
Query: 1 cagtggagggatgatgtgatcctagacttagattttcttcactgagcagaccatgcgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 cagtggagggatgatgtgatcctagacttagattttcttcactgagcagaccatgcgaag 523
Query: 61 ttttagccaagtccacatatggtaggggtttgataaatagttttttgatgggttgattga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ttttagccaagtccacatatggtaggggtttgataaatagttttttgatgggttgattga 463
Query: 121 atccgactgttccagatcaaacagcatccaatgagagggaaaaaccaatcagggctctct 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 atccgattgttccagatcaaacagcatccaatgagagggaaaaaccaatcagggctctct 403
Query: 181 cttttcctcagttaaaaagtttatttatattcgtctttgcttatttcatacacagtatgt 240
|||||||||||||||||||| | ||||||||||| |||||||||||||||||||| | ||
Sbjct: 402 cttttcctcagttaaaaagtatgtttatattcgtttttgcttatttcatacacagaaagt 343
Query: 241 attttgatcatatcccccatttcccattgctttgttttgtcctctctgaacttcttccca 300
|||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||
Sbjct: 342 attttgatcatatcccccattttccattgctctgttttatcctctctgaacttcttccca 283
Query: 301 aggagtctctttctacttccatgttgagcatgcatgtacatgcgcgcgcacatgtgtgaa 360
|||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||
Sbjct: 282 aggagtctctttctacttccatgttgagcatgcatgtacatgtgtgtgcacatgtgtgaa 223
Query: 361 tgtgtgcgtatgagtatgtgtt 382
|||||||||| |||||||||||
Sbjct: 222 tgtgtgcgtacgagtatgtgtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
