Query= MSMg01no156_n19.b1 MSMg01no156_n19.b1 CHROMAT_FILE:
MSMg01no156_n19.b1 PHD_FILE: MSMg01no156_n19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:06 2005
(317 letters)
>mm_chr18_58547852_58548568
Length = 717
Score = 431 bits (223), Expect = e-125
Identities = 298/349 (85%), Gaps = 44/349 (12%)
Strand = Plus / Plus
Query: 4 ggaattcaccaaatagcccttcatacttaaacttcgaagaccctttctcagcctaaaatg 63
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaccaagtagcccttcatacttaaacttcgaagaccctttctcagcctaaaatg 263
Query: 64 gcttatcctttgtgaagtatttaatccatcatccccactccacttttt------------ 111
||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 264 gcttatcctttgtgaagtacttaatccatcatccccactccactttttaatccatcctct 323
Query: 112 -------------------gatccattcatttagccctctggagttcaatactgtgtgtg 152
|||||||||||||||||||||||||||||||||||| ||||
Sbjct: 324 tagctctctgccactttttgatccattcatttagccctctggagttcaatactgtatgtg 383
Query: 153 ataacactttc----ctctcttgttagcttgtgttcatctattcctctctctctctctcc 208
||||||||||| |||||||||||||||||||||||||||||| | | ||||||||||
Sbjct: 384 ataacactttctcatctctcttgttagcttgtgttcatctattcccccccctctctctcc 443
Query: 209 ccctctctctctcccccctccctaaggtctctctgaaacattatccactggactgccaga 268
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 c----tctctctcccc--tccctaaggtctctctgaaacattatccactggactgccaga 497
Query: 269 tcc---tctaatcaggctccatcctttgtcccttgccccacctcttcta 314
||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 498 tccacctctaatcaggctccatcctttgtcccttgccccaccttttcta 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_n19.g1 MSMg01no156_n19.g1 CHROMAT_FILE:
MSMg01no156_n19.g1 PHD_FILE: MSMg01no156_n19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:06 2005
(289 letters)
>mm_chr18_58715753_58716441
Length = 689
Score = 538 bits (278), Expect = e-157
Identities = 284/286 (99%)
Strand = Plus / Minus
Query: 1 cgtagcgcaccaccttcagcaagtaccagaaatcatcccagaaatacgggaacagaagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 cgtagcgcaccaccttcagcaagtaccagaaatcatcccagaaatacgggaacagaagtt 427
Query: 61 tctgcaggaaatgcagggagagcagtccagccccaaatcctgtgagccatgacaggagca 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 426 tctgcaggaaatgcagggagagcagtccagcccccaatcctgtgagccatgacaggagca 367
Query: 121 tgggtgcccagacctccagcagacccgatgggtcctagcagtgtctctttcttttccaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tgggtgcccagacctccagcagacccgatgggtcctagcagtgtctctttcttttccaag 307
Query: 181 agtttcacctctttttgccccggagactcctgtcctgaaagctcagaggctggcacctgt 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 306 agtttcacctctttttgccctggagactcctgtcctgaaagctcagaggctggcacctgt 247
Query: 241 agttctggctcaagatgtctttgtatatcccatgaaagaaatcaaa 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 agttctggctcaagatgtctttgtatatcccatgaaagaaatcaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
