XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTATT
TTAAAGTATATCACATTTTGAAACATTTAACTTTAATGTGATCATCTTAA
GCTCAGATATAATGAAAGCAGTAAAGCTTGAATGTATTCATTTACTCAAA
AGTCCTTTATTAGGACATTCCATTTAAAGATATTTTTCTTTACTAAAAGG
GATGCAGTCTCATTGGCTTAGATCTCAGTATAGAGGAAGCTAAATAAATA
GATGCCCAGATATGGATAAACATATTGGTCTACCTGTTTTGTTTTGCCCA
TCACATCCCTGCACAAAGGGGAAAACTTTCTCACATCATTCACCTTTCTC
CCTTGTCTTGTTACCCCCATACACTGTTCAATTTTCCTTTTGAAAATCAG
AAAATTTCTTATCTTGATCCATCATAAAATATTTAAATTTCTAGTGTAGA
GTTCAGAGTTGGTCCAATCACAAGTTAATAAGTTAAAGGTACTTAATGAA
AAACAGCACTCCTTTCATGCAGAGAAAAATAAGGAAAACTTTGTGAAATA
GTTAATGCCTCTTCATCCACAAAGGAATTTATTTATTGGCACATTCTGTG
TAGACTAAGAAGTTTGACATGTAAAACAAATGACAAATGGTCTATAGCAA
TTCCATTTGTAATAAAAGTCAGCTTCATTAAAAAAATGAAATATGTATAC
AGAGAGGAGAGAGAGAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCGGGGCCAAAAAGGGGAAGGGGTGGGTAAGGG
AAGGGGGGGGGTANTTATNTATTTTTTTTTNTGGGGTGTTGTGGTTGTTT
TTAGGAGGTGTGTTCGCGAAAAGAAGAGGCTGCCTGCGAATCGTTCCGCT
GCCGCTACTCCGCGTCGCTATGGTTTCGTTCATCACCTCAACTTAGGCTT
TCGGCGGGCTCGCTCAGAGAAATGAGAAGGAGTACACACACTAATAAAAC
TAAACCCCTTCCCCTGTTTTTTCCTTACCATTTCTACGGTTGGCGGCCGC
AAAATATTTAAGTGATTCCCAAAACAGGACCCCCGGGTATATTTGGGAAT
TTATGTCTTATATTGACTTTCTTTCGTAAAAAAAAAAAAAAAAAAACCTT
GGTGGGGGGTGGGGGGGGGTTATAATTCCCCTTCAACTCAATTATAAGGC
GTCTTCACCTGCCTATTATTTATTCCACCACGACTATATCACATAACATA
AAAAATGCTCCCTCTGTGGTTTGGAAGTGGTATGGGCGCATAAGCGCGTC
AGACGGGCCCATATGAAGGAGCGCCAACACCACCATGGCTACGTTATCGT
CCGTCCTCAACCCCCTCAATCTCCCCCACCAACAACACTATCGACTCATA
TTATGTCTGACCGTAGGTGAGCGGCAATAGAAACCGGGCTAATAGAAAAC
CAATGAGATCAAAAAGCAACGTACCAACGTACTACCACGCCTTGAGCCAT
ACCGACCTTGTCN

Query= MSMg01no157_g04.b1 MSMg01no157_g04.b1 CHROMAT_FILE:
MSMg01no157_g04.b1 PHD_FILE: MSMg01no157_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:43 2005
         (682 letters)



>mm_chr18_89669383_89670463
          Length = 1081

 Score = 1197 bits (619), Expect = 0.0
 Identities = 664/679 (97%), Gaps = 3/679 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcttattttaaagtatatcacattttgaaacatttaactttaatgtgatcatctt 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 ggaattcttattttaaagtatatcacattttgaaacatttaactttaatgtgatcatctt 821

                                                                       
Query: 64  aagctcagatataatgaaagcagtaaagcttgaatgtattcatttactcaaaagtccttt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 aagctcagatataatgaaagcagtaaagcttgaatgtattcatttactcaaaagtccttt 761

                                                                       
Query: 124 attaggacattccatttaaagatatttttctttactaaaagggatgcagtctcattggct 183
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 760 attaggacattccatttaaagatatttttctttactaaaagggatgcagtctcactggct 701

                                                                       
Query: 184 tagatctcagtatagaggaagctaaataaatagatgcccagatatggataaacatattgg 243
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 700 tagatctcagtatagaggaagctaaataaatagatgcccagatatagataaacatattgg 641

                                                                       
Query: 244 tctacctgttttgttttgcccatcacatccctgcacaaaggggaaaactttctcacatca 303
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 640 tctacctgttttgttttgcccatcacatccctgcacaaagaggaaaactttctcacatca 581

                                                                       
Query: 304 ttcacctttctcccttgtcttgttacccccatacactgttcaattttccttttgaaaatc 363
           |||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||
Sbjct: 580 ttcacctttctcccttgtcttgctattcctatacactgttcaattttccttttgaaaatc 521

                                                                       
Query: 364 agaaaatttcttatcttgatccatcataaaatatttaaatttctagtgtagagttcagag 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 agaaaatttcttatcttgatccatcataaaatatttaaatttctagtgtagagttcagag 461

                                                                       
Query: 424 ttggtccaatcacaag-ttaataagttaaaggtacttaatgaaaaacagcactcctttca 482
           |||||||||||||||| ||| || |||||||||||||||||||||| ||||||| |||||
Sbjct: 460 ttggtccaatcacaagctta-taggttaaaggtacttaatgaaaaa-agcactcatttca 403

                                                                       
Query: 483 tgcagagaaaaataaggaaaactttgtgaaatagttaatgcctcttcatccacaaaggaa 542
           || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tgtagagaaaaatagggaaaactttgtgaaatagttaatgcctcttcatccacaaaggaa 343

                                                                       
Query: 543 tttatttattggcacattctgtgtagactaagaagtttgacatgtaaaacaaatgacaaa 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tttatttattggcacattctgtgtagactaagaagtttgacatgtaaaacaaatgacaaa 283

                                                                       
Query: 603 tggtctatagcaattccatttgtaataaaagtcagcttcattaaaaaaatgaaatatgta 662
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tggtctatagcaattccatttgtaataaaagtcagcttcattaaaaaaatgaaatatgta 223

                              
Query: 663 tacagagaggagagagaga 681
           ||||||||||||| |||||
Sbjct: 222 tacagagaggagaaagaga 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1081
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1071
Effective search space:   719712
Effective search space used:   719712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)