Query= MSMg01no157_o05.b1 MSMg01no157_o05.b1 CHROMAT_FILE:
MSMg01no157_o05.b1 PHD_FILE: MSMg01no157_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:19 2005
(320 letters)
>mm_chr18_8108731_8109448
Length = 718
Score = 549 bits (284), Expect = e-161
Identities = 308/316 (97%), Gaps = 2/316 (0%)
Strand = Plus / Minus
Query: 5 gaattccagaggagacaagagaatcccagatgcagctgcagggcaatcgtttttcagttt 64
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 349 gaattccagaggagacaagagaatcccagctgcagctgca-ggcaatcgtttttcagttt 291
Query: 65 tacctaaaataagatccacacatttaccataaattatttgggaaaaaaaatcagtgagaa 124
||||||||||||||||||||||||||| |||| | ||||||| |||||||||||||||||
Sbjct: 290 tacctaaaataagatccacacatttacaataagtcatttggg-aaaaaaatcagtgagaa 232
Query: 125 aaatcagctgtttaaagagctgtgtgtgggcctgagacagtttggcaggaaaaggccctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 aaatcagctgtttaaagagctgtgtgtgggcctgagacagtttggcaggaaaaggccctt 172
Query: 185 gccaccaaatgactacctacttctatcctgggacccacattatggagggagagaacgaac 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 171 gccaccaaatgactacctacttctatcctgggacccacattatggagggagagaacaaac 112
Query: 245 ttttacaagttatcctctgaagtctacacatctgttgtcccacatatgtgctcctcccac 304
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 111 ttttacaagttatcctctgaagtctacacatctgttgtaccacatatgtgctcctcccac 52
Query: 305 agaaataagtttaatc 320
||||||||||||||||
Sbjct: 51 agaaataagtttaatc 36
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 718
Length adjustment: 9
Effective length of query: 311
Effective length of database: 709
Effective search space: 220499
Effective search space used: 220499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_o05.g1 MSMg01no157_o05.g1 CHROMAT_FILE:
MSMg01no157_o05.g1 PHD_FILE: MSMg01no157_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:19 2005
(290 letters)
>mm_chr18_7972200_7972889
Length = 690
Score = 530 bits (274), Expect = e-155
Identities = 283/286 (98%)
Strand = Plus / Plus
Query: 1 ttttgtcctagtattccttaggaaacagctctaagccttaaagagtattgtgacttactt 60
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 ttttgacctagtattccttaggaaacagctctaaaccttaaagagtattgtgacttactt 260
Query: 61 catgaacaggcatttgactttcaggtagttaatatatcttaaaatagttttcctggtgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catgaacaggcatttgactttcaggtagttaatatatcttaaaatagttttcctggtgag 320
Query: 121 atatcaagttattgcctgattaagttctggcaggaaataatgtaattcatattagagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atatcaagttattgcctgattaagttctggcaggaaataatgtaattcatattagagaag 380
Query: 181 agatcctgtcaaatttttgatgctttgtagaagttgtatatgcatatttatacatgtgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 agatcctgtcaaatttttgatgctttgtagaagttgtatatgcatatttatacatatgtg 440
Query: 241 tgtgtgtaatgtgtacacactaagataaatatcaattagagtccta 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgtgtaatgtgtacacactaagataaatatcaattagagtccta 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
