Query= MSMg01no160_g15.b1 MSMg01no160_g15.b1 CHROMAT_FILE:
MSMg01no160_g15.b1 PHD_FILE: MSMg01no160_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:22 2005
(269 letters)
>mm_chr18_50171467_50172134
Length = 668
Score = 458 bits (237), Expect = e-133
Identities = 258/265 (97%), Gaps = 1/265 (0%)
Strand = Plus / Plus
Query: 5 gaattcttgactcacgtctcagaggcctccaagaccaggggccaaactttcttgccccat 64
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 205 gaattcttgactcacatctcagaggcctccaagaccaggggccagactttcttgccccat 264
Query: 65 ctatggatgggggtagtggagtgaatccaaagagatggataatggtatacagccaagaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctatggatgggggtagtggagtgaatccaaagagatggataatggtatacagccaagaag 324
Query: 125 tgaacgcatgcttcaaaccaatagaactgaaaagaaaggtgagttgagctcaatgaatga 184
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 325 tgaacgcatgcttcaaaccaatagaactgagaagaaaggtgagttgagctcaatgaatga 384
Query: 185 ggggcaggaactggacaatgcccttcagattcatgggtcactctttctcattgtttatgt 244
||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||
Sbjct: 385 ggggcaggaactggacaatgccctttagattcatgggtcactcttcc-cattgtttatgt 443
Query: 245 atgaacttgctatatgacatacacg 269
||| |||||||||||||||||||||
Sbjct: 444 atgcacttgctatatgacatacacg 468
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 668
Length adjustment: 9
Effective length of query: 260
Effective length of database: 659
Effective search space: 171340
Effective search space used: 171340
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no160_g15.g1 MSMg01no160_g15.g1 CHROMAT_FILE:
MSMg01no160_g15.g1 PHD_FILE: MSMg01no160_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:22 2005
(286 letters)
>mm_chr18_50320771_50321456
Length = 686
Score = 553 bits (286), Expect = e-162
Identities = 286/286 (100%)
Strand = Plus / Minus
Query: 1 ctaaaataatgggaaggtgacaaagggggaggaaggcagaagagagaccagcaaaagcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ctaaaataatgggaaggtgacaaagggggaggaaggcagaagagagaccagcaaaagcaa 295
Query: 61 tgtgctgaatcaatgcacatctttaactaaatgagagatgagggcacttttaggacagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tgtgctgaatcaatgcacatctttaactaaatgagagatgagggcacttttaggacagca 235
Query: 121 gcaaaaactgcgtcagattaagagaatgtgggtagggaccggagagatggctcagaggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 gcaaaaactgcgtcagattaagagaatgtgggtagggaccggagagatggctcagaggtt 175
Query: 181 aagcgtgcagactgctcttacaagggcctgagttctgtccctagcacccaccctagggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 aagcgtgcagactgctcttacaagggcctgagttctgtccctagcacccaccctagggag 115
Query: 241 ttcacaacctgtaactccagcaccacgatacaggatgtcctcttct 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 ttcacaacctgtaactccagcaccacgatacaggatgtcctcttct 69
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
