Query= MSMg01no160_p10.b1 MSMg01no160_p10.b1 CHROMAT_FILE:
MSMg01no160_p10.b1 PHD_FILE: MSMg01no160_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:04 2005
(312 letters)
>mm_chr18_59810538_59811249
Length = 712
Score = 580 bits (300), Expect = e-170
Identities = 306/308 (99%)
Strand = Plus / Plus
Query: 4 ggaattcacttttatagacagcctgtactctagctcagatcttcctgccttagacactga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcacttttatagacagcctgtactctagctcagatcttcctgccttagacactga 263
Query: 64 atgctgaaatataagcatatagcactaagatgggcttacaattgactttctacttacctt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atgctgaaatataagcatatagcactaagatgggcttacaattgactttctacttacctt 323
Query: 124 ttatactgtgaatttatttcttgtacaagatttatttttgtaatcttgaagtagagtcaa 183
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttatactgtgaatgtatttcttgtacaagatttatttttgtaatcttgaagtagagtcaa 383
Query: 184 tcaagtcttctatgtgcactcagattcatttatacacaaagaacaaatttaactcttttg 243
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcaattcttctatgtgcactcagattcatttatacacaaagaacaaatttaactcttttg 443
Query: 244 caacttagatgtattacatgactttatcttgtcagtttgtactaggtggtacctctaaca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caacttagatgtattacatgactttatcttgtcagtttgtactaggtggtacctctaaca 503
Query: 304 aaactata 311
||||||||
Sbjct: 504 aaactata 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no160_p10.g1 MSMg01no160_p10.g1 CHROMAT_FILE:
MSMg01no160_p10.g1 PHD_FILE: MSMg01no160_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:04 2005
(285 letters)
>mm_chr18_59951533_59952218
Length = 686
Score = 511 bits (264), Expect = e-149
Identities = 279/284 (98%), Gaps = 1/284 (0%)
Strand = Plus / Minus
Query: 1 cataggcgtttcttacaaggattccttagcctatgtatagtctctctgagaaacggaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 cataggcgtttcttacaaggattccttagcctatgtatagtctctctgagaaacggaggg 425
Query: 61 gaag-aatggaggggagaaacggagggcatggtctcaactcagtgcttcagatctgagat 119
| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ggagaaacggaggggagaaacggagggcatggtctcaactcagtgcttcagatctgagat 365
Query: 120 ttattgctctgtggctttctgaaaccagataagaaaggttatgctaagtggagttacagg 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gtattgctctgtggctttctgaaaccagataagaaaggttatgctaagtggagttacagg 305
Query: 180 aaaagtgaaaaggaagttaaaggattggtttggaatagaattggagattaagggttaatt 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 304 aaaagtgaaaaggaagttaaaggattggtttggaatagaattggagattaagggataatt 245
Query: 240 ttttcccttggatggtgaaattcggtactaatgctcaaaactag 283
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ttttcccttggatggtgaaattcggtactaatgctcaaaactag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 686
Length adjustment: 9
Effective length of query: 276
Effective length of database: 677
Effective search space: 186852
Effective search space used: 186852
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
