Query= MSMg01no162_e16.b1 MSMg01no162_e16.b1 CHROMAT_FILE:
MSMg01no162_e16.b1 PHD_FILE: MSMg01no162_e16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:37 2005
(308 letters)
>mm_chr18_24162323_24163030
Length = 708
Score = 553 bits (286), Expect = e-162
Identities = 298/302 (98%)
Strand = Plus / Minus
Query: 5 gaattctctggtgtttaatcaggtctgacttttgactgaaacttctggggcactgtgtac 64
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 331 gaattctctggtgtttaatcaggtctgacttttgactgaaacttctagggcactgtgtac 272
Query: 65 acgcatatggtctttctcccgtgtgaactctgtggtggaggataaggtcagaactctgac 124
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 271 acgcatatggtctttctcccgtgtgaactctgtggtggagaataaggtcagaactctgac 212
Query: 125 gaaaggctttgttacaactactacagtggtagggcttctccccagaatgcactctctggt 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 211 gaaaggctttgttacaactactacagtggtagggcttctccccagaatgcactctctgat 152
Query: 185 gtttagtgaggtctgaactttgactgaaactcttactgcacagattgcacgtgtatggtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 gtttagtgaggtctgaactttgactgaaactcttactgcacagattgcacgtgtatggtt 92
Query: 245 tttctccagtgtggaccctctgatgttttatgagatctgaaccgcgactgaagcttttag 304
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 91 tttctccagtgtggaccctctgatgctttatgagatctgaaccgcgactgaagcttttag 32
Query: 305 aa 306
||
Sbjct: 31 aa 30
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 708
Length adjustment: 9
Effective length of query: 299
Effective length of database: 699
Effective search space: 209001
Effective search space used: 209001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no162_e16.g1 MSMg01no162_e16.g1 CHROMAT_FILE:
MSMg01no162_e16.g1 PHD_FILE: MSMg01no162_e16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:37 2005
(281 letters)
>mm_chr18_24018429_24019108
Length = 680
Score = 485 bits (251), Expect = e-142
Identities = 272/279 (97%), Gaps = 1/279 (0%)
Strand = Plus / Plus
Query: 1 cctcatctgtgtctcacagaacaaacagtaggaagtttctagaaagagggtcatgaatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctcatctgtgtctcacagaacaaacagtaggaagtttctagaaagagggtcatgaatat 260
Query: 61 taattgcagaaatacgacgtacagtgaaacttgaaaatagtatgtagagagctgactcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taattgcagaaatacgacgtacagtgaaacttgaaaatagtatgtagagagctgactcct 320
Query: 121 acggcgtgattaataatctctcagggaaccggtgccctgagatggtgggccccggggtct 180
||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 acgacttgattaataatctctcagggaaccggtgccctgagatggtgggccccgtggtct 380
Query: 181 gcatggtggccactgaacaaggccaggaggggtgtggagtagaagcaaagggaggggctg 240
|||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 gcatggtg-ccactgaacaaggccaggaggggtgtggagcagaagcaaagggaggggctg 439
Query: 241 tatgaagaaagccatggggagactggaaggcaaaatgtc 279
|||||||||||||||||||||||||||| |||||||||
Sbjct: 440 gatgaagaaagccatggggagactggaagacaaaatgtc 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 680
Length adjustment: 9
Effective length of query: 272
Effective length of database: 671
Effective search space: 182512
Effective search space used: 182512
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
