Query= MSMg01no164_f02.b1 MSMg01no164_f02.b1 CHROMAT_FILE:
MSMg01no164_f02.b1 PHD_FILE: MSMg01no164_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:08 2005
(586 letters)
>mm_chr18_7218997_7219982
Length = 986
Score = 1056 bits (546), Expect = 0.0
Identities = 573/582 (98%)
Strand = Plus / Plus
Query: 5 gaattctaagatggtggggctgcccacaaggcagacaggtctacaaaatctccctgcaac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaagatggtggggctgcccacaaggcagacaggtctacaaaatctccctgcaac 264
Query: 65 agttattctcattatccctctaaatgtcaaacttcttaactcccccctaactctttgcat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agttattctcattatccctctaaatgtcaaacttcttaactcccccctaactctttgcat 324
Query: 125 gcagctttgtggtgagcagcccacctttctgtcttcatctctgtactccagacatcttac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcagctttgtggtgagcagcccacctttctgtcttcatctctgtactccagacatcttac 384
Query: 185 catggatttggccacattaaaccaacagcaactttgagactttccatgccagcctttgcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 catggatttggccacattaaaccaacagcaactttgagactttccatgccagcctttgcc 444
Query: 245 tcatcttcctgaaatgcttttcctggtgtgtctgtctaccagaaaccttccacaagccat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcatcttcctgaaatgcttttcctggtgtgtctgtctaccagaaaccttccacaagccat 504
Query: 305 gaagcagcatctcctccctccacccccgcccggctttcccctcctagaagaactgactac 364
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 505 gaagcagcatctcctccctccagccttgcccggctttcccctcctagaagaactgactac 564
Query: 365 ccctccccatcctttatttttctaccattcccaggactggctggcttcagctggatgcct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ccctccccatcctttatttttctaccattcccaggactggctggcttcagctggatgcct 624
Query: 425 aatatgcatacagtattttagagagctatgttctttctgtctgacaccactactcaattg 484
|||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aatatgcacacagtactttagggagctatgttctttctgtctgacaccactactcaattg 684
Query: 485 tggcatcctcatggtagagatgaatatttatttctgtctgtatcctgcacacactgccac 544
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 685 tggcatcctcatggtagagatgaatatttacttctgtctgtatcctgcacatactgccac 744
Query: 545 attctcaacccaagacctcatagcaggcatccaatactgacc 586
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 745 attctcaacccaagacctcaaagcaggcatccaatactgacc 786
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_f02.g1 MSMg01no164_f02.g1 CHROMAT_FILE:
MSMg01no164_f02.g1 PHD_FILE: MSMg01no164_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:08 2005
(437 letters)
>mm_chr18_7341207_7342043
Length = 837
Score = 828 bits (428), Expect = 0.0
Identities = 434/436 (99%)
Strand = Plus / Minus
Query: 1 aaaaaatagtacagaaaatatgctgcatgattctgcatataggattttcaaagtaatcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 aaaaaatagtacagaaaatatgctgcatgattctgcatataggattttcaaagtaatcta 577
Query: 61 catcaccagaagacagatcagcggaggcaaggtatagggtagggtatgacagaaaggggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 catcaccagaagacagatcagcggaggcaaggtatagggtagggtatgacagaaaggggc 517
Query: 121 acaaagaacttgtggaaatggttgattcaactggccatttgaattgtggtaatgacttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 acaaagaacttgtggaaatggttgattcaactggccatttgaattgtggtaatgacttct 457
Query: 181 aagataggtcaagttgatcaaagtgtgttgtcctttctcataattcagtgtactccatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aagataggtcaagttgatcaaagtgtgttgtcctttctcataattcagtgtactccatga 397
Query: 241 agttttaagaaattagatacattatctgaaaaaatttttaaaattgagtgtagagacttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 agttttaagaaattagatacattatctgaaaaaatttttaaaattgagtgtagagacttg 337
Query: 301 gctttcaggcaaaacaactaattctttttaaaaatccattccccacctgaatattgaacc 360
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 336 gctttcaggcaaaacaactaattctttttaaaaatccattccctagctgaatattgaacc 277
Query: 361 tcctctccaacctgggagcctttcagcacctcacatgcatccactagtgctagcaagact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tcctctccaacctgggagcctttcagcacctcacatgcatccactagtgctagcaagact 217
Query: 421 atattctagttatgtg 436
||||||||||||||||
Sbjct: 216 atattctagttatgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
