XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTGTGAATCTAGATGTTCTTTGATGGATGATTTTATTTTTCTCTTTTTT
TCTTGGATATTTTCTATATTTACGTTAAAAATGCTATCCCAAAAGTCCCC
TATACCCTCCCCCCCCCGCCCTGTTCCCCTACCCACTCACTCCCACTTCT
TGGCCCTGGCTTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGACCAAG
GGGCCTCTCTTCCCAATGATGGCCAATTAGGCCATCTTCTCCTATATATG
CAGCTAGAGACACGAGTTCTGGAGGTACTGATAAGTTCATATTGTTGTTC
CACCTATAGTTTTTCATACCCCCCCCGCTCTTGGGTACTTTCTCTAGCTC
CTACATTGAGAGCCCCGCGTTCCATCCTATAGACGACTGTGAGCAACCAC
TTCTGTGTTTGCCAAGCACTGGCATAGCCTCACACAAGACAGCTATACCA
GGGTCCCTTCAACAAAATCTTGCTGGCATATGCAATAGTGTCTTGGTTTG
GTGGCTGATTATGGGATGGATCCCCGGGTGGGGTAGTCTTCTGGAAGGTC
CATCCCTTTGTCTTAACTCCAATTTTGTTTCCTGTAATACCTTCCATGAA
TATTTTTGTTCCCCATTCTAAGGAAGAACGAATTATTCCCCCAGTTGGTC
TCTCCATTCTTCTTGACTTTTCTTGTGATTTTATTAAATGTTTCCTTGTG
T

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXAGGTTGCCAGCAAGATTTGAGGGCAGGGGTG
TGCAAACTTGGTCACTGGCTATTGTGTGGACTTCTGGACAGCCTCCAGCT
GGGACATTGTTTCAGCATTTGTTAACTTACAGCCTTCTCTGGATGTGGGT
AAAGAAAGGTGGGAGGACCTTAGGCCAGGTTCCCACTGTTCTCTCTTATT
GCACGATGTTAGTTTTTATATGTCATTTTCTCCTTAAATATTTACAATTG
CACTTCTAATGAGATGTCCTTGTGTATAGTGTTTGCAAGTGTCATGAAAA
TAGAGGACTTTACTCAAGATGCTGATTTAAGAACTTTATTGCTTTTTCTT
CCTGTTCTTTCTGCTACCGTTAATGAATATACAGCCAATTAGATTCCTTC
CCTTGCCTTAGCCTTTTTCTTTTTTTCTTCTTATTTTGGTATTGGGAGGC
TTTCTATATCTGTTTTAGGTGCAGGCAAATGGAAGTCCAAGCTGAAGCTT
CCAGAGGATGGCTATGCCTAGAGTATTCGTGTTGCCTTTACTGACTTGCT
AGAGCCAGTTGTTAAGTTTCAGAACTTTTGTGAGATGGTTGTGGAACTAG
CTGTTATTATCAATTATCAGTGTTATATGTTCACATACTTAAATAGATTT
CATTGAAAGCAGCAATAGTCCTCAAATACTTATAATN

Query= MSMg01no164_i20.g1 MSMg01no164_i20.g1 CHROMAT_FILE:
MSMg01no164_i20.g1 PHD_FILE: MSMg01no164_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:26 2005
         (629 letters)



>mm_chr18_3273911_3274942
          Length = 1032

 Score = 1199 bits (620), Expect = 0.0
 Identities = 628/632 (99%), Gaps = 3/632 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aggttgccagcaagatttgagggcaggggtgtgcaaacttggtcactggctattgtgtgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 aggttgccagcaagatttgagggcaggggtgtgcaaacttggtcactggctattgtgtgg 773

                                                                       
Query: 61  acttctggacagcctccagctgggacattgtttcagcatttgttaacttacagccttctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 acttctggacagcctccagctgggacattgtttcagcatttgttaacttacagccttctc 713

                                                                       
Query: 121 tggatgtgggtaaagaaaggtgggaggaccttaggccaggttcccactgttctctcttat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 tggatgtgggtaaagaaaggtgggaggaccttaggccaggttcccactgttctctcttat 653

                                                                       
Query: 181 tgcacgatgttagtttttatatgtcattttctccttaaatatttacaattgcacttctaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 tgcacgatgttagtttttatatgtcattttctccttaaatatttacaattgcacttctaa 593

                                                                       
Query: 241 tgagatgtccttgtgtatagtgtttgcaagtgtcatgaaaatagaggactttactcaaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tgagatgtccttgtgtatagtgtttgcaagtgtcatgaaaatagaggactttactcaaga 533

                                                                       
Query: 301 tgctgatttaagaactttattgctttttcttcctgttctttctgctaccgttaatgaata 360
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 532 tgctgatttaagaactttattgctttttcttcctgttctttctgttaccgttaatgaata 473

                                                                       
Query: 361 tacagccaattagattccttcccttgccttagcctttttctttttttcttcttattttgg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tacagccaattagattccttcccttgccttagcctttttctttttttcttcttattttgg 413

                                                                       
Query: 421 tattgggaggctttctatatctgttttaggtgcaggcaaatggaagtccaagctgaagct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tattgggaggctttctatatctgttttaggtgcaggcaaatggaagtccaagctgaagct 353

                                                                       
Query: 481 tccagaggatggctatgcctagagtattcgtgttgcctttactgacttgctagagccagt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tccagaggatggctatgcctagagtattcgtgttgcctttactgacttgctagagccagt 293

                                                                       
Query: 541 tgttaagtttcagaacttttgtgagatggttgtggaactagctgttattatcaattatca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tgttaagtttcagaacttttgtgagatggttgtggaactagctgttattatcaattatca 233

                                           
Query: 601 gtgt---tatatgttcacatacttaaatagat 629
           ||||   |||||||||||||||||||||||||
Sbjct: 232 gtgtatgtatatgttcacatacttaaatagat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1032
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1022
Effective search space:   632618
Effective search space used:   632618
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)