Query= MSMg01no165_b07.b1 MSMg01no165_b07.b1 CHROMAT_FILE:
MSMg01no165_b07.b1 PHD_FILE: MSMg01no165_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:07 2005
(688 letters)
>mm_chr18_50523748_50524835
Length = 1088
Score = 1239 bits (641), Expect = 0.0
Identities = 674/685 (98%)
Strand = Plus / Plus
Query: 4 ggaattctctgcaattccgccctgcttcttctttttgtcacaactgtctctgtccttgac 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctgcaattcagccctgcttcttctttttgtcacaactgtctctgtccttgac 263
Query: 64 tttgacaaacttcatccacatgcaaattgtttgcacctcactttagcccaccctggaccc 123
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttgacaagcttcatccacatgcaaattgtttgcacctcactttagcccaccctggaccc 323
Query: 124 atccaaacttcctgtcacaggtattcacttctgaattcgtttcacttggcctcccactgg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atccaaacttcctgtcacaggtattcacttctgaattcgtttcacttggcctcccactgg 383
Query: 184 aatctcacaggccaaagggcaagctagagactcactctggtgttcttaaatattttgagt 243
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 384 aatctcacaggccaaagggcaagccagagactcactctggtgttcgtaaatattttgagt 443
Query: 244 tattattatcatcttttaaaaatgattcatatttgtaatttataaaagtatatagcatct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tattattatcatcttttaaaaatgattcatatttgtaatttataaaagtatatagcatct 503
Query: 304 atagcctcacatacattacacatccaatataggggtgtgaataaataaatgtctggctag 363
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atagcctcacatacgtaacacatccaatataggggtgtgaataaataaatgtctggctag 563
Query: 364 gtagacgggaacatgagatgagagctgcttggaaagaagaaaagttcaggagcacaagac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtagacgggaacatgagatgagagctgcttggaaagaagaaaagttcaggagcacaagac 623
Query: 424 tggcaagaatcagtgacaaagttaaactctagacgcactggctctgacggtctccatggg 483
||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 624 tggcaagaatcagtggcaaagttaaactctagacacactggctctgactgtctccatggg 683
Query: 484 gacagtgctgaagcagtgtgaaggtcatcactcctctcaacagccttacacaaaagagac 543
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 684 gacagtgctgaagcagtgtgaaggtcatcactcctctcaccagccttacacaaaagagac 743
Query: 544 ccagcactccactcattaagaggctcctccctcacacaatcatctgtaaagactgaataa 603
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 744 ccagcactccactcattaagagtctcctccctcacacaatcatctgtaaagactgaataa 803
Query: 604 aggctgaatttaaagcaacaggtaaagttaatccttagatttagaaggtgaaaggttaaa 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 aggctgaatttaaagcaacaggtaaagttaatccttagatttagaaggtgaaaggttaaa 863
Query: 664 aatgaaaggctgaggtttactctat 688
|||||||||||||||||||||||||
Sbjct: 864 aatgaaaggctgaggtttactctat 888
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1088
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1078
Effective search space: 730884
Effective search space used: 730884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no165_b07.g1 MSMg01no165_b07.g1 CHROMAT_FILE:
MSMg01no165_b07.g1 PHD_FILE: MSMg01no165_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:07 2005
(654 letters)
>mm_chr18_50567657_50568711
Length = 1055
Score = 1174 bits (607), Expect = 0.0
Identities = 643/655 (98%), Gaps = 1/655 (0%)
Strand = Plus / Minus
Query: 1 agtgctagctaatgtcatgtataaagcacttagaaagtaaggctcctgcctaggaaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 agtgctagctaatgtcatgtataaagcacttagaaagtaaggctcctgcctaggaaggaa 796
Query: 61 agaaagccccacactttgaagagagttctggattttgaacagctgacttaactgatagag 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 agagagccccacactttgaagagagttctggattttgaacagctgacttaactgatagag 736
Query: 121 ctctagaaagagcaac-tgatcctcgtggtttgatataagtgaagtagtcactgtttagc 179
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ctctagaaagagcaacttgattctcgtggtttgatataagtgaagtagtcactgtttagc 676
Query: 180 ctgcttggcctctgaagggaaatcttgttttcctgcaaaacatgttgtttttaatgtttc 239
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 675 ctgcttggcctctgaagggaaatcttgttttcctgcaaaacgtgctgtttttaatgtttc 616
Query: 240 tttctatgattttgatttttcaaatgacatattaagttcacagactgtggtgcaatgccc 299
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 615 tttctatgattttgatttttcaaatgacatgttaaattcacagactgtggtgcaatgccc 556
Query: 300 aacaggtgaatggactgatgtcacagcatagaaacatcttggccaaagcagtttgttagg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 aacaggtgaatggactgatgtcacagcatagaaacatcttggccaaagcagtttgttagg 496
Query: 360 ttagaatgaccatgctttgtggacctatgcaaacattgcagtgtttacaaagctgaccta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ttagaatgaccatgctttgtggacctatgcaaacattgcagtgtttacaaagctgaccta 436
Query: 420 tgtcgtagctttaaattacgtgaaggcagtatattgaaagcccagccactgggtatgcca 479
|||| ||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||
Sbjct: 435 tgtcatagctttaaattacgtgaaggcaatatattgaaagcccagccagtggctatgcca 376
Query: 480 gccctcattctgcactgggttaatatgctcagtgaggaagaaactaagagaacagagtag 539
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gccctcattcttcactgggttaatatgctcagtgaggaagaaactaagagaacagagtag 316
Query: 540 ctcaactagactctgctacacaatctgctctgttttaacaattagcctcataagtttgta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ctcaactagactctgctacacaatctgctctgttttaacaattagcctcataagtttgta 256
Query: 600 taactaattcaattagtcattttcatactattttctgcatattaagttttatttc 654
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 taactaattcaattagtcattttcatactattttctgcatattaagttttatttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1055
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1045
Effective search space: 672980
Effective search space used: 672980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
