Query= MSMg01no165_l16.b1 MSMg01no165_l16.b1 CHROMAT_FILE:
MSMg01no165_l16.b1 PHD_FILE: MSMg01no165_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:00 2005
(576 letters)
>mm_chr18_11231521_11232496
Length = 976
Score = 1050 bits (543), Expect = 0.0
Identities = 566/575 (98%), Gaps = 4/575 (0%)
Strand = Plus / Minus
Query: 4 cggaattctcaaatgatccc--gcaaccagttggggctttccacagacctcaccagtgag 61
|||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||
Sbjct: 776 cggaattctcaaatga--cctggcaaccagttggggctttccaaagacctcaccagtgag 719
Query: 62 tattcctctgcaaagtcagctgagagggagaatccatctcacaggcagctatggtccctg 121
|||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 718 tattcctctgcaaagtcagctgagagagagaatccatctcgcaggcagctatggtccctg 659
Query: 122 ggagtcatcctcggactctggagatgcgggtcaaactgaaagccatgcttggagttcttg 181
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 658 ggagtcatcctcggactctggagatgtgggtcaaactgaaagccatgcttggagttcttg 599
Query: 182 gcttgtgttaaagaactttgatgtatgtggccccatggtacaggcaggctatgcagccaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gcttgtgttaaagaactttgatgtatgtggccccatggtacaggcaggctatgcagccaa 539
Query: 242 tcctgccatccctttctttgccttatctgtgaaatcctcctggcaattctgtctgcacag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 538 tcctgccatccctttctttgccttatctgtgaaatcctcctggcaattctgtctgcatag 479
Query: 302 ggaattggcgtttcattagtcatggctttaatgcctatctgctattttttaagtagaagt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ggaattggcgtttcattagtcatggctttaatgcctatctgctattttttaagtagaagt 419
Query: 362 gtgagtatatatgcatctctgcgtgtgcgtgtgtgcatgtcttccctcgggagcagtgag 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gtgagtatatatgcatctctgcgtgtgcgtgtgtgcatgtcttccctcgggagcagtgag 359
Query: 422 aggaactcagctgctcagtctagcagtgactcaggctatgtgacaagtctccctaagact 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 aggaactcagctgctcagtctagcagtgactcaggctatgtgacaagtctccctaagact 299
Query: 482 catgtgggaagatgtgttcaataaagggagatcagaaacaaatggtcccttcctagtttt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 catgtgggaagatgtgttcaataaagggagatcagaaacaaatggtcccttcctagtttt 239
Query: 542 gtcaatagtagagaatttctgtctcttggaaaaac 576
|||||||||||||||||||||||||||||||||||
Sbjct: 238 gtcaatagtagagaatttctgtctcttggaaaaac 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no165_l16.g1 MSMg01no165_l16.g1 CHROMAT_FILE:
MSMg01no165_l16.g1 PHD_FILE: MSMg01no165_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:00 2005
(103 letters)
>mm_chr18_11051682_11052184
Length = 503
Score = 199 bits (103), Expect = 3e-56
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 1 caaaggaccccacgacctgagcatcccgaaacagggtcaagaaagtttaaggtcagttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaaggaccccacgacctgagcatcccgaaacagggtcaagaaagtttaaggtcagttac 260
Query: 61 tagcaactgcgcggggcttaatttggaaggaggggctgggagg 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagcaactgcgcggggcttaatttggaaggaggggctgggagg 303
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 103
Length of database: 503
Length adjustment: 8
Effective length of query: 95
Effective length of database: 495
Effective search space: 47025
Effective search space used: 47025
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
