Query= MSMg01no166_h13.b1 MSMg01no166_h13.b1 CHROMAT_FILE:
MSMg01no166_h13.b1 PHD_FILE: MSMg01no166_h13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:59 2005
(231 letters)
>mm_chr18_74238251_74238880
Length = 630
Score = 439 bits (227), Expect = e-128
Identities = 230/231 (99%), Gaps = 1/231 (0%)
Strand = Plus / Plus
Query: 1 acagtcattttcaaatgactgtaaagtctggaataaactgtagtttctgtgacccccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagtcattttcaaatgactgtaaagtctggaataaactgtagtttctgtgacccccaac 260
Query: 61 acacagccaagccggtctccatctaggcgtgaggaatttactagcaatggagtttccgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acacagccaagccggtctccatctaggcgtgaggaatttactagcaatggagtttccgta 320
Query: 121 tgattaatccaacttgaacaagtaattttcatgggaaaaaaatcatagccgagtagatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgattaatccaacttgaacaagtaattttcatgggaaaaaaatcatagccgagtagatga 380
Query: 181 aacacaaatgtgtttttatatattaaataaacacacacagacacatacagg 231
|||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 aacacaaatgtgttttta-atattaaataaacacacacagacacatacagg 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 630
Length adjustment: 9
Effective length of query: 222
Effective length of database: 621
Effective search space: 137862
Effective search space used: 137862
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no166_h13.g1 MSMg01no166_h13.g1 CHROMAT_FILE:
MSMg01no166_h13.g1 PHD_FILE: MSMg01no166_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:59 2005
(335 letters)
>mm_chr18_74348279_74349013
Length = 735
Score = 609 bits (315), Expect = e-179
Identities = 330/335 (98%)
Strand = Plus / Minus
Query: 1 caatacagccagagatgtagaaaacaaaacaaaacaaccctctgtcttgaaaaacaacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 caatacagccagagatgtagaaaacaaaacaaaacaaccctctgtcttgaaaaacaacag 476
Query: 61 caataacaaaaagtgagataggttcttacagagaaagacagattaaggatacatactgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 caataacaaaaagtgagataggttcttacagagaaagacagattaaggatacatactgac 416
Query: 121 acgtatcagctacatacataagaaacaatacacagatatccctgcgtctttggaaacagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 acgtatcagctacatacataagaaacaatacacagatatccctgcgtctttggaaacagg 356
Query: 181 acctgatttcacttcccagtacctatttcaggtgcattgcacaacactcactgcagcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 355 acctgatttcacttcccagtacctatttcaggtgcattgcacaacactcactgcagcctg 296
Query: 241 cggagatctaacatactcctctggcttcctagggcacctgcatagatgtggtataatagt 300
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aggatatctaacatactcctctggcttcctagggcacctgcatagatgtggtataatagt 236
Query: 301 caaagctatctagagtaagataacttataggacac 335
|||||||||||||| ||||| ||||||||||||||
Sbjct: 235 caaagctatctagaataagacaacttataggacac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|