Query= MSMg01no167_d21.b1 MSMg01no167_d21.b1 CHROMAT_FILE:
MSMg01no167_d21.b1 PHD_FILE: MSMg01no167_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:57 2005
(672 letters)
>mm_chr18_39424454_39425525
Length = 1072
Score = 1249 bits (646), Expect = 0.0
Identities = 661/666 (99%)
Strand = Plus / Plus
Query: 4 ggaattctcagttcttctagacccacatttgcccgagtgctgcccagttcccactttgat 63
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 204 ggaattctcagttcttctagacccacatttgcccgagtgctgccctgttcccactttgat 263
Query: 64 gataatgaactgagcttatgaacttgtaagccagtcccaactaaatgttattcttataag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gataatgaactgagcttatgaacttgtaagccagtcccaactaaatgttattcttataag 323
Query: 124 agttgccttggttacagtgtctattcatagtagtaaaaccctaactaagacaaatatcaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agttgccttggttacagtgtctattcatagtagtaaaaccctaactaagacaaatatcaa 383
Query: 184 gtcttgaagacaaggtcgaagtgaaagaaaatgtcaaatctgtaaaacacaaaacaaagc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtcttgaagacaaggtcgaagtgaaagaaaatgtcaaatctgtaaaacacaaaacaaagc 443
Query: 244 aaaacaaaataggggaagaaaagaccatgtaggaactctggcttgaagctctgtttcctg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaaacaaaataggggaagaaaagaccatgtaggaactctggcttgaagctctgtttcctg 503
Query: 304 ttaatccagtttgtcatgtgactgacagctctatggggcatagggttcagtctctagaca 363
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 504 ttaatccagtttgtcatgtgactgacagctctacggggcatagggttcagtctctagaca 563
Query: 364 atttagtgttgatgttcaaatggagtatgagaagtagtcctggctcaactccagctaagt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atttagtgttgatgttcaaatggagtatgagaagtagtcctggctcaactccagctaagt 623
Query: 424 aaagtttctagattgttacaactgatcttcaggtgatggatgactaggggatgtgagtct 483
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 624 aaagtttctagattgttacaactgatcttcaggtgatggattactaggggatgtgagtct 683
Query: 484 aggaaccctacttgaagattcgggcagaaggtggaagacaggtgcacatcatgtggttct 543
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 684 aggaaccctacttgaagatttgggcagaaggtggaagacaggtgcacatcatgtggtcct 743
Query: 544 caggcaagtgcatggcgctggttgctaatgttagtctagtgatccttcttggtcatgcag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 caggcaagtgcatggcgctggttgctaatgttagtctagtgatccttcttggtcatgcag 803
Query: 604 gtaggtggagttggcatctgactagagaaaggagcaagcatacacagggggaatggatag 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gtaggtggagttggcatctgactagagaaaggagcaagcatacacagggggaatggatag 863
Query: 664 agatgg 669
||||||
Sbjct: 864 agatgg 869
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no167_d21.g1 MSMg01no167_d21.g1 CHROMAT_FILE:
MSMg01no167_d21.g1 PHD_FILE: MSMg01no167_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:57 2005
(637 letters)
>mm_chr18_39537483_39538517
Length = 1035
Score = 1205 bits (623), Expect = 0.0
Identities = 633/637 (99%), Gaps = 2/637 (0%)
Strand = Plus / Minus
Query: 1 ccatagtgagagtgatagataccagaccggatcccatgggacagcacggaatttccgtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 ccatagtgagagtgatagataccagaccggatcccatgggacagcacggaatttccgtga 776
Query: 61 tgggtcctaaggaagaagtacttttagtgtttagggtgattctgggacttgtcgaatggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 tgggtcctaaggaagaagtacttttagtgtttagggtgattctgggacttgtcgaatggg 716
Query: 121 gcctccagcttaacacgagtcatcagtagcccagatgacagtaaaggggcttttggccct 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gcctccagcttagcacgagtcatcagtagcccagatgacagtaaaggggcttttggccct 656
Query: 181 tagtcatgggcttatagccagaagggttgttgagtcaagagcaccagccggggaagctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tagtcatgggcttatagccagaagggttgttgagtcaagagcaccagccggggaagctgc 596
Query: 241 atgcctgagtgaagggcagaaagtcttgttccgataggctttatactctgagcctatgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 atgcctgagtgaagggcagaaagtcttgttccgataggctttatactctgagcctatgag 536
Query: 301 gtaatggggccttttgtcaagggtcacttaacctgcagattcaagttaatgaatacagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gtaatggggccttttgtcaagggtcacttaacctgcagattcaagttaatgaatacagaa 476
Query: 361 gggacatctggccatagtactggagcacatctggactttagggtaggtacaagacctggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gggacatctggccatagtactggagcacatctggactttagggtaggtacaagacctggt 416
Query: 421 aggatgtgtgttgatgtctccaaaaagaaccctctgaattcaaatcttcactggagtttt 480
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 415 aggatgtgtgttgatgtctccagaaagaaccctctgaattcaaatcttcactggagtttt 356
Query: 481 ggcttagctcaggaagcaatattatagccagcggggcctcactagcagcgcctgtggcca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ggcttagctcaggaagcaatattatagccagcggggcctcactagcagcgcctgtggcca 296
Query: 541 gactcctggggtcaattccataaaagatcaggtagctatgtagtatgacaaccaaccgct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gactcctggggtcaattccataaaagatcaggtagctatgtagtatgacaaccaaccgct 236
Query: 601 gtgagatatgtttttgatcatttcagtggaaaaccat 637
||||||| ||||||||||||||||||||||||||||
Sbjct: 235 gtgagat--gtttttgatcatttcagtggaaaaccat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1035
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1025
Effective search space: 642675
Effective search space used: 642675
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|