CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCACTGGATTTCTGTAAAAATGAGTTTCCTTATGAAAATCAGTTACT
AAGCCACATAAGTAACTGAGTTTGGCCTAGTACATTTTATATGTACCTGG
ATGCTGTCCACTGGATGTTGACATCTGGATTCCACAATTACACAGAGAGG
CAAGTGTATCTACACTTATACACATGCATAACACTTACCCCCCAACACAC
ACATCAGATCCATTATTTTTTTTAAATCCCTATGAATTTAAGAAAATGAA
TGTAAAACCGTTAGAGCCTACTGCCTCAGTTTAGAAATTATAAAATATTT
TCATTTATGGAAGTTAATAGATGAATTCTTCAAAAGAAAAAGATAACATC
TTGAAGACATATAAAACAAAGTACCTAACAATAACTTTACTCATAAGCCC
AACATATTAAGTTCAAATAATAATTTATTATAAATATTTAATCAGAGAAG
TTAGGCCATCCTCAGATATGTAGCCAATTTTAAGACAGGATAGGCTACAA
GAGACACATTCTGGAGAGATCAAAATAAAACAAAATTTAAAAATAAAAAC
TTAATAGCTTCCAATAAATACAGAAACGGACCTAAAAATAGTAAGTAAAT
AATGCTTTATCTGAGATGATGTTCATCATTTCCTACATGAAATATCAAGA
AGTCCCAAATTTATGTTATCAGTATTTATT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCCCTACAGTAGGGCTTTGAACCTT
CACAATACCAAGGGCCTCTCCTCCAATTGGTGCCCAACAAGGCCATCCTC
TACTACATATGTATCTGGAGCCATGGGTCATCGTTGGGCACTGGGATTGG
GGAACTAAAGGGAGTGGGAGAAAATACATGACATGCCAGAGTTTCTGTGC
TTTGGGCGGGTGGACTCAAGAGGACTGCCACACACTTTCCAGGTGGCCCT
GTGTGGCTGTTTGGCTGTAGGAAGCCACGGAATCCAAGCTCGCTGTAGGG
TGAACAAGGGGCACTCCAAGGTCTCTGGGCCTCATGGAGGCCAGAGATAG
CAGGTTCCCAGTCTCACGCATCTCAGACACCACTGGACACCACGGAAGAG
CTGATAACAAAATGGTAGCTACAGGGACCACTCAGTCAGACCTGGGGCAA
AGGGAGGACAGGGAAGGAATATAGTGCGTGATGGATGGTTCTCATGTAAT
CCAGAGTCCTTGGTCCAGTCCATGGCTGGAACTTAGGAAGGTCTTCCAAC
TGTATGTTATAAGTCATTTTTTTTACGGCAATGTCTATCCCATTCTTCTA
TATTGTTAGTCCCCGCATGACCACTATCTTTTTATAGCTTTTATAAGACT
TTCTGCACACAAGGTCGCGCAGAATTCATATTCTGTTTTTATCACCCAAC
GAACCTTTGN

Query= MSMg01no167_i06.b1 MSMg01no167_i06.b1 CHROMAT_FILE:
MSMg01no167_i06.b1 PHD_FILE: MSMg01no167_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:17 2005
         (685 letters)



>mm_chr18_87189865_87190949
          Length = 1085

 Score = 1286 bits (665), Expect = 0.0
 Identities = 677/681 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcactggatttctgtaaaaatgagtttccttatgaaaatcagttactaagccacat 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactggatttgtgtaaaaatgagtttccttatgaaaatcagttactaagccacat 264

                                                                       
Query: 65  aagtaactgagtttggcctagtacattttatatgtacctggatgctgtccactggatgtt 124
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaataactgagtttggcctagtacattttatatgtacctggatgctgtccactggatgtt 324

                                                                       
Query: 125 gacatctggattccacaattacacagagaggcaagtgtatctacacttatacacatgcat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gacatctggattccacaattacacagagaggcaagtgtatctacacttatacacatgcat 384

                                                                       
Query: 185 aacacttaccccccaacacacacatcagatccattattttttttaaatccctatgaattt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aacacttaccccccaacacacacatcagatccattattttttttaaatccctatgaattt 444

                                                                       
Query: 245 aagaaaatgaatgtaaaaccgttagagcctactgcctcagtttagaaattataaaatatt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aagaaaatgaatgtaaaaccgttagagcctactgcctcagtttagaaattataaaatatt 504

                                                                       
Query: 305 ttcatttatggaagttaatagatgaattcttcaaaagaaaaagataacatcttgaagaca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttcatttatggaagttaatagatgaattcttcaaaagaaaaagataacatcttgaagaca 564

                                                                       
Query: 365 tataaaacaaagtacctaacaataactttactcataagcccaacatattaagttcaaata 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tataaaacaaagtacctaacaataactttactcataagcccaacatattaagttcaaata 624

                                                                       
Query: 425 ataatttattataaatatttaatcagagaagttaggccatcctcagatatgtagccaatt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 625 ataatttattataaatatttaatcagagaagttaggccatcctcagatatgtaaccaatt 684

                                                                       
Query: 485 ttaagacaggataggctacaagagacacattctggagagatcaaaataaaacaaaattta 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttaagacaggataggctacaagagacacattctggagagatcaaaataaaacaaaattta 744

                                                                       
Query: 545 aaaataaaaacttaatagcttccaataaatacagaaacggacctaaaaatagtaagtaaa 604
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 745 aaaataaaaacttaatagcttccaataaatacagaaatggacctaaaaatagtaagtaaa 804

                                                                       
Query: 605 taatgctttatctgagatgatgttcatcatttcctacatgaaatatcaagaagtcccaaa 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 taatgctttatctgagatgatgttcatcatttcctacatgaaatatcaagaagtcccaaa 864

                                
Query: 665 tttatgttatcagtatttatt 685
           |||||||||||||||||||||
Sbjct: 865 tttatgttatcagtatttatt 885


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space:   725625
Effective search space used:   725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)