Query= MSMg01no167_n19.b1 MSMg01no167_n19.b1 CHROMAT_FILE:
MSMg01no167_n19.b1 PHD_FILE: MSMg01no167_n19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:44 2005
(560 letters)
>mm_chr18_5778481_5779440
Length = 960
Score = 1011 bits (523), Expect = 0.0
Identities = 532/535 (99%)
Strand = Plus / Minus
Query: 26 aggcagctggtaatcttcctctctgtatagatgtgcttactttggatatgtcatacatgg 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 aggcagctggtaatcttcctctctgtatagatgtgcttactttggatatgtcatacatgg 901
Query: 86 aggcaaagcatgtagtctttggtcagtgatgctcatcattcagcacaacagtttcaagat 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 aggcaaagcatgtagtctttggtcagtgatgctcatcattcagcacaacagtttcaagat 841
Query: 146 ttatccagcctattgtatgagctacaatttcatctcttttcatggtcaaataatatttta 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 ttatccagcctattgtatgagctacaatttcatctcttttcatggtcaaataatatttta 781
Query: 206 ttgtatttacatattttgttagccagttgacttggttttactgccaacttttagctacaa 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 ttgtatttacatattttgttagccagttgacttggttttactgccaacttttagctacaa 721
Query: 266 ctatactgttaacattcatgtgttaacattttgttgtgtgtacagtgtagcatattgtgg 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ctatactgttaacattcatgtgttaacattttgttgtgtgtacagtgtagcatattgtgg 661
Query: 326 ttagcctaaccttatttacttgtttaaaaaatggtgttgttgctattctcctctatactt 385
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ttagccttaccttatttacttgtttaaaaaatggtgttgttgctattctcctctatactt 601
Query: 386 agcacatgtgcacacgactatgcacaagaggttattgtgtggatgtgttttggcttctta 445
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 600 agcacatgtgcacacgactacgcacaagaggttattgtgtggatgtgttttggcttctta 541
Query: 446 agggtatatagaatatatatgtgtgtaaataaagacaatattcaataaaaatatgttcaa 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 agggtatatagaatatatatgtgtgtaaataaagacaatattcaataaaaatatgttcaa 481
Query: 506 aaagaatatacatgtgtggtctgtaaatatcttataccaattttatttttagttt 560
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 480 aaagaatatacatgtgtggtctataaatatcttataccaattttatttttagttt 426
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 960
Length adjustment: 10
Effective length of query: 550
Effective length of database: 950
Effective search space: 522500
Effective search space used: 522500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no167_n19.g1 MSMg01no167_n19.g1 CHROMAT_FILE:
MSMg01no167_n19.g1 PHD_FILE: MSMg01no167_n19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:44 2005
(264 letters)
>mm_chr18_5634986_5635648
Length = 663
Score = 464 bits (240), Expect = e-135
Identities = 255/260 (98%), Gaps = 1/260 (0%)
Strand = Plus / Plus
Query: 2 aaacatttaaaaataatagctattttcatatgttggatcatgcgtattttgaaaactcct 61
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 202 aaacatttaaaaataatagctattttcatatgttggatcatgtgtattttgaaaactcct 261
Query: 62 actgcttaggtactgactttaccatgtgataatcgcacttatgctggcgctgggtatgcc 121
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 actgctttggtactgactttaccatgtgataatcgcacttatgctggcgctgggtatgct 321
Query: 122 acttcatgtgcatatggagcctagagttcagggtagtatgtgtgcccgaactaatggtct 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 acttcatgtgcatatggagcctagagttcagggtagtatgtgtgcccgaactaatggtct 381
Query: 182 gtccctaatttaacactgaaatgtttaaacgtgaaataaaaaccagtgtttttcaagtaa 241
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 g-ccctaatttaacactgaaatgtttaaacgtgaaataaaaaccagtgtttttcaagtaa 440
Query: 242 taaaatccaagttaactatg 261
||||||||||||||| ||||
Sbjct: 441 taaaatccaagttaagtatg 460
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 264
Length of database: 663
Length adjustment: 9
Effective length of query: 255
Effective length of database: 654
Effective search space: 166770
Effective search space used: 166770
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
