CTAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAGTGTATCCTTCAATGTACCCCTCACTATACCAATGTATTCCTCA
ATATAACATTGTGTTCCTCAATATTCTAGTGTATACTTCAACATACCAGT
GTATTCCTCAATATATCAGTGTATCCTTCAATATATCAATGTATCTCTGT
ACTATCCCAGAAGCCCTTCCCCATTGCTGGGGTCTTTGTTTTTAGTTTGT
GCCTCTTAATAATTTTATGCACATAGATGCTGGAATGATTATGTTAAAAT
TCAAACCAAGTCAAATCATCTTGGTGCCCTCCTGTGGTTTCCTATTAAAC
TTATATTATTATTTCACCCNTCCCACCCTGCCTGCCACCCCACGTGATCC
CCTGTGCCCACCTGTCTCAACTTAAAATGTGTGCTTTGACCTCATTCACT
GCCCTCAGAAATGCCAGCCTCGTTGTCATGTCCTGTAACCTCACGCTGTC
GTCTCGACCTTTCATCCTCTGTCTCTGGAGGTTCAAGTATTTCCTCTTCT
GAGAGACTCTTTCTGACCCTGTACCCCAAGTAACTTCCTGCTCATACAAC
ATGTCGTCACCGTGTAAACTCTTATATATGCCTCCCGTGCCTTATTGCCA
CCCTTTTTGATTGACTTTATTCATCTATCCTCTCCCTGAAATATTTTCCC
TATTCCCCCCTAATTTTTTCTTTT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTCCTCAGGTAAAATCATTTTTC
ACTTCCTATCAGCTGTGCTGGCAAGATTGAAAGTGCCTTTCACTTAGCCC
CGCCCATTACACGAGAAGATAAAATGAGCCAATATTTTTTTTCCACACAT
ATAGAGAAACCATAAATTATGTCATCTTAAGAAACTGTATCACCTACTGT
CTTACATGGAAATTTTATCTTCTTACATGTTTTCTTTTTAAAATTCAGTG
GATATGCAAGGATTTAAAAATTGCTCCACAGAATATTAGGTGAGGATGCA
TCCCTTGATGTTGATCTGCCCAGCACCGGCAGGGATGGAGATAGAGAAGA
GTTATATCCTTCGACATGATGAAACGCTCCTGCACGGAACACAGCCATAC
ATCACAAGAGTTTATTTATTGACAAATTAATTCTCAATAAGTATAATTCA
TCTGCTTAACATTAAAAGCAACTAAACTTTTATAGCCTTCCACATTAGAC
TTTTCGTATGAGCAAGCTGACAAATGAGAAAAAAAATGTCTAGTTAGACT
ATGTATCTTGATTTTGTATTCAGATATATGGTAAATATAACTATAGATAA
AACCTCAGAAAGACAAGCACTCAGAGAAATTGGAAGCTGGCATTGCTGGC
TCTTCATTTTTCTTCTTTCCCTG

Query= MSMg01no169_f09.b1 MSMg01no169_f09.b1 CHROMAT_FILE:
MSMg01no169_f09.b1 PHD_FILE: MSMg01no169_f09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:00 2005
         (271 letters)



>mm_chr18_83655682_83656352
          Length = 671

 Score =  509 bits (263), Expect = e-149
 Identities = 266/267 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccagtgtatccttcaatgtacccctcactataccaatgtattcctcaatataaca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagtgtatccttcaatgtacccctcactataccaatgtattcctcaatataaca 264

                                                                       
Query: 65  ttgtgttcctcaatattctagtgtatacttcaacataccagtgtattcctcaatatatca 124
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgtattcctcaatattctagtgtatacttcaacataccagtgtattcctcaatatatca 324

                                                                       
Query: 125 gtgtatccttcaatatatcaatgtatctctgtactatcccagaagcccttccccattgct 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgtatccttcaatatatcaatgtatctctgtactatcccagaagcccttccccattgct 384

                                                                       
Query: 185 ggggtctttgtttttagtttgtgcctcttaataattttatgcacatagatgctggaatga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggggtctttgtttttagtttgtgcctcttaataattttatgcacatagatgctggaatga 444

                                      
Query: 245 ttatgttaaaattcaaaccaagtcaaa 271
           |||||||||||||||||||||||||||
Sbjct: 445 ttatgttaaaattcaaaccaagtcaaa 471


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 671
Length adjustment: 9
Effective length of query: 262
Effective length of database: 662
Effective search space:   173444
Effective search space used:   173444
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no169_f09.g1 MSMg01no169_f09.g1 CHROMAT_FILE:
MSMg01no169_f09.g1 PHD_FILE: MSMg01no169_f09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:00 2005
         (339 letters)



>mm_chr18_83797127_83797865
          Length = 739

 Score =  656 bits (339), Expect = 0.0
 Identities = 339/339 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   agggatggagatagagaagagttatatccttcgacatgatgaaacgctcctgcacggaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 agggatggagatagagaagagttatatccttcgacatgatgaaacgctcctgcacggaac 480

                                                                       
Query: 61  acagccatacatcacaagagtttatttattgacaaattaattctcaataagtataattca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 acagccatacatcacaagagtttatttattgacaaattaattctcaataagtataattca 420

                                                                       
Query: 121 tctgcttaacattaaaagcaactaaacttttatagccttccacattagacttttcgtatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tctgcttaacattaaaagcaactaaacttttatagccttccacattagacttttcgtatg 360

                                                                       
Query: 181 agcaagctgacaaatgagaaaaaaaatgtctagttagactatgtatcttgattttgtatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 agcaagctgacaaatgagaaaaaaaatgtctagttagactatgtatcttgattttgtatt 300

                                                                       
Query: 241 cagatatatggtaaatataactatagataaaacctcagaaagacaagcactcagagaaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 cagatatatggtaaatataactatagataaaacctcagaaagacaagcactcagagaaat 240

                                                  
Query: 301 tggaagctggcattgctggctcttcatttttcttctttc 339
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tggaagctggcattgctggctcttcatttttcttctttc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space:   240900
Effective search space used:   240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)