TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATTTATAAATTATTTGACAACACTATAGCAAAATTCTGCCTTCTA
CCCAGGCCATCTATGCTTCTGTCTGTAGCTCAGAACTCTTTCCTTTGATA
CAATTTTTTGGATATTTTATGTATTTATATTTCAAATGTTATCCCCTTTC
CTGGCTTCCCCTCTGGAGCCCCCCTTTTCAATCCCCCATCCTCCTGCTTC
TATGAGGATGCTCCCCCTCCCACCCACCCACTCCCACCTCACCACCCTGG
CATTCCACTACACTGGGGAATTGTGTCTTCACAAGATCAAGAGCTTCTCC
TCCTACTATGTTTTTTTTCCCATGCTNACGCCCATAGGNAGATATGCAAC
TGGAGCCATGTGTACCCCTTGGAAGAAAGAAACAGATCCTGGGAGCTGGG
GAGAAGAGTCTGGATGTTTGATATTGATCTTCTTCCTATGCCGTTGCAAA
CCCTTTTAGCTCCTTTAGTACTTTCTCTAATTCCTCCCTTGCTGTATTCA
CACCTACATCCTAGTGGTTGGTTGCAATTACTCACTTCTGCATTTGTCAG
TCTACTTCCCTAGTTTCTCCTGCGACTGTTCTTTCTTACTTCTTGTTCCT
TCGCTCCTTTCTGCTTTCATCCAAATTGCTTGCCTTTCTATCTTCATCGC
TTCCTCAATATCTCTCCGCCTTTTGACCTA

TCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAAAGCTGTGATCTGGGAACTTCTCT
TGAAGGGTTTCCTTACAGTGTGCCAGGCTCATGCCCTAGGCAAGATCAAT
AGGAGATCTCAGAATCAGTACCACGGTCCCACTGTCCACTGCATGCTTGA
GTGAGTGTGATATGGAAATGGAAACCATCTGTAGTCCCCATTAAAGACAA
AATCTGGGACTGCAGATAGACCTCAGTGGTAGAGGACTTGCTTAGAATGT
GCATAATTCTGCATTTAATTTTCAGCCCAGGAAAACAAAAGAAACAATAG
CCACAGTTCGGTGNCTCCCTTNACGNAGCCAGTACTTGCCAATCGTGTGT
AAGACCCTGTGTTTACCCCCTAACAAAAAACAAAATAGAGCACTCTACAT
ACGATGGATTGGACAAAAATGGTGTTTGCAGGAGCTCCATCAGAGCTTCA
GCGCTCATGTGGAAATGGAAGCCTGCTATTTAGCAGGACAGCAGCCATGG
AATTCTGTCCTCCGTGCCTGGTCCTTCTTTCAGCTACAACACCCATATTT
CTTACTTGGTAAAGATGGAAGAGAATTGGTTGGTATACATTCCGGACTAG
CCTTTCTTCTCAGTGCTTGTTTCACCTCTCTAGCTGCCTTTAATTCCCCT
TCTTGTGATTATTAATTTGCCACCCTCCT

Query= MSMg01no171_m09.b1 MSMg01no171_m09.b1 CHROMAT_FILE:
MSMg01no171_m09.b1 PHD_FILE: MSMg01no171_m09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:04 2005
         (314 letters)



>mm_chr18_23074967_23075680
          Length = 714

 Score =  576 bits (298), Expect = e-169
 Identities = 307/310 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatttataaattatttgacaacactatagcaaaattctgccttctacccaggcca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 205 gaattcatttataaattatttgacaacactatagcaaaattctgccttctatccaggcca 264

                                                                       
Query: 65  tctatgcttctgtctgtagctcagaactctttcctttgatacaattttttggatatttta 124
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 265 tctatgcttctgtctgtagctcagaactctttcctttaatacaattttttggatatttta 324

                                                                       
Query: 125 tgtatttatatttcaaatgttatcccctttcctggcttcccctctggagccccccttttc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtatttatatttcaaatgttatcccctttcctggcttcccctctggagccccccttttc 384

                                                                       
Query: 185 aatcccccatcctcctgcttctatgaggatgctccccctcccacccacccactcccacct 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatcccccatcctcctgcttctatgaggatgctccccctcccacccacccactcccacct 444

                                                                       
Query: 245 caccaccctggcattccactacactggggaattgtgtcttcacaagatcaagagcttctc 304
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 445 caccaccctggcattccactacactggggaattgagtcttcacaagatcaagagcttctc 504

                     
Query: 305 ctcctactat 314
           ||||||||||
Sbjct: 505 ctcctactat 514


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space:   215025
Effective search space used:   215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no171_m09.g1 MSMg01no171_m09.g1 CHROMAT_FILE:
MSMg01no171_m09.g1 PHD_FILE: MSMg01no171_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:04 2005
         (282 letters)



>mm_chr18_23259953_23260634
          Length = 682

 Score =  520 bits (269), Expect = e-152
 Identities = 278/281 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaagctgtgatctgggaacttctcttgaagggtttccttacagtgtgccaggctcatgcc 60
           |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 380 aaagctgtgatctgggaactgctcttgaagggtttccttacagtgtggcaggctcatgcc 321

                                                                       
Query: 61  ctaggcaagatcaataggagatctcagaatcagtaccacggtcccactgtccactgcatg 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 320 ctaggcaagatcaataggagatctcagaatcagtaccacggtcccactgtccaccgcatg 261

                                                                       
Query: 121 cttgagtgagtgtgatatggaaatggaaaccatctgtagtccccattaaagacaaaatct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cttgagtgagtgtgatatggaaatggaaaccatctgtagtccccattaaagacaaaatct 201

                                                                       
Query: 181 gggactgcagatagacctcagtggtagaggacttgcttagaatgtgcataattctgcatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gggactgcagatagacctcagtggtagaggacttgcttagaatgtgcataattctgcatt 141

                                                    
Query: 241 taattttcagcccaggaaaacaaaagaaacaatagccacag 281
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 taattttcagcccaggaaaacaaaagaaacaatagccacag 100


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space:   183729
Effective search space used:   183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)