Query= MSMg01no173_h24.b1 MSMg01no173_h24.b1 CHROMAT_FILE:
MSMg01no173_h24.b1 PHD_FILE: MSMg01no173_h24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:11 2005
(311 letters)
>mm_chr18_40579280_40579991
Length = 712
Score = 588 bits (304), Expect = e-172
Identities = 307/308 (99%), Gaps = 1/308 (0%)
Strand = Plus / Plus
Query: 5 gaattctctaagcctctgttctcaccagaggcctgtaggaggagtcaggagatagtcatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctaagcctctgttctcaccagaggcctgtaggaggagtcaggagatagtcatt 264
Query: 65 ttcatttcaaaagcatcaattgccaaactctcatagcagagactgctgctggggaatgag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcatttcaaaagcatcaattgccaaactctcatagcagagactgctgctggggaatgag 324
Query: 125 ctaaggtgtggctgtggctgttggtgcacacaaggaacaca-ggaggagactctcagtca 183
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 325 ctaaggtgtggctgtggctgttggtgcacacaaggaacacaaggaggagactctcagtca 384
Query: 184 gagagtgcgccccatttctgttataataaataagcatgccattccaaatctaactgcagt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gagagtgcgccccatttctgttataataaataagcatgccattccaaatctaactgcagt 444
Query: 244 tcccacatcctcatatccactaccctttcttttcccttcccttcccttcccttcccttcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcccacatcctcatatccactaccctttcttttcccttcccttcccttcccttcccttcc 504
Query: 304 cttccctt 311
||||||||
Sbjct: 505 cttccctt 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 712
Length adjustment: 9
Effective length of query: 302
Effective length of database: 703
Effective search space: 212306
Effective search space used: 212306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_h24.g1 MSMg01no173_h24.g1 CHROMAT_FILE:
MSMg01no173_h24.g1 PHD_FILE: MSMg01no173_h24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:11 2005
(290 letters)
>mm_chr18_40700536_40701225
Length = 690
Score = 551 bits (285), Expect = e-161
Identities = 288/289 (99%)
Strand = Plus / Minus
Query: 1 ttgaaccttgttagaacgtttgattttaaagcataaagaaaagacattttctttcctcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ttgaaccttgttagaacgtttgattttaaagcataaagaaaagacattttctttcctcaa 430
Query: 61 gccttcaacaccacacctgcagaggacttctggaattcagttgctcactagtgtgcctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gccttcaacaccacacctgcagaggacttctggaattcagttgctcactagtgtgcctgg 370
Query: 121 gtatctggctcagtgagcactttggataggttcccaagagaaggagtcatgctctatcaa 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 369 gtatctggctcagtgagcactttggataggttcccaagagaagaagtcatgctctatcaa 310
Query: 181 ctgagccttggtttggggagtagactggctttgaagggtcagagttaatgtgcttacata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ctgagccttggtttggggagtagactggctttgaagggtcagagttaatgtgcttacata 250
Query: 241 ctgaacccaagaagcaccggggaagcattcgtagattggcttcaacctc 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ctgaacccaagaagcaccggggaagcattcgtagattggcttcaacctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
