CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAGTCCTATTGCTGATGATAGCAAACATTTTGTGCATAGGCCTTG
GAAGATTCTAGCTGGATATAACCCGAATTTCTCCCCTTGTTTTATCTTTC
AGAGTATCAGGAAATACTATGTAAGCCACCAAGCATGGGAAGCAATCATT
TGTCCTACCCAGCTGTGGTGCTTATGACCTATAACAATGGCCAGAATGGT
ACAATATCCTTAGAGATTTAGTAGTAGTATTCATATCTTGGTGGTCACCA
ATAACTAATTGTTTTGACTTAAAGCTCACTCAACAGAAATCATGCCTAGA
ACTAGAAAATGAATTCCTAAAGACATAATTTACAAATACTAAGGAGAACA
TAAAGGCCAATGAAAGCCAGTATGGGTTTCTTCTTAGAACAAAGAATACC
TGATTAAAATGCAAGAAAGTACTACAGAAAAAAATAGTATCTGAATTTCA
GCACAGTATTTTATCATGCATTTGTGGTATTGTCAAAAATATAAAAACTT
AAATTTGATGTAAGGTAACAACTGTTATTATTACTATTAGTAATTGTAAG
TAAAATATATATTAATTGGTTAAAGTAAGTTAAAGGCCAACTAGAAAATT
ATTTTCTTGCATTATTTAACAGGGTATCTCTCTCCTTGGTCCAATAACAA
ATGTCTTGTGATTGATAAGGACN

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTGTTGCAGGAGACAATTTCTTG
AACAGGAATACAAATGGCTCAGTCTATAAGATCATTAATTGATAAATGAT
ATCTCATGAAACTGAAAATTTTCTGCAAGGTAAGGGAAACGGTAAATAAG
ATAAAACAGCAGCCTGTAAATTAGGAAAGGATCCTTATGAACCCTACATC
TGGCAGAGGGCTAATATCCAAAACTTAGAAAGAACTCAAGAATTTAAATG
CCAACATCCCAAATTAACCCAATTAAAAATGGTGCACAGAACTAAACAGA
GAATTCTCAACAGATAAATTTAGAATGCCCAGAAGCACTTAAAGTAATGT
TCAAAGTTCTTAGTCATCAGGGAAAGAAAATCAAAACAACTATGACCTTT
CATCTTATACCCATCAGAATGGCTATGATGAAAAGTTCAAGTGATAGCCC
ATGCTTGGAAGGATCTGGAGCAAGTGGACCAGTTTTCCATTGCTGGTAGG
AGAGCAAACTTGTACAACCAACTTGAAAGTAAATCCAGTGGTTTCTCAAA
AAACTGGAAATAATTCTACCTTAAGTATCAGCTATACCACTCCTGGGCAT
ATACTCAAAAGATGCTCCAACATCCACAAAGACACTTGATCAACCATATT
TATACAAGTTTACGCATAATAGCCAGA

Query= MSMg01no174_j06.b1 MSMg01no174_j06.b1 CHROMAT_FILE:
MSMg01no174_j06.b1 PHD_FILE: MSMg01no174_j06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:28 2005
         (674 letters)



>mm_chr18_72520022_72521094
          Length = 1073

 Score = 1224 bits (633), Expect = 0.0
 Identities = 661/671 (98%), Gaps = 4/671 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaagtcctattgctgatgatagcaaacattttgtgcataggccttggaagattct 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcaagtcctattgctgatgatagcaaacattttgtgcataggccttggaagattct 265

                                                                       
Query: 65  agctggatataacccgaatttctccccttgttttatctttcagagtatcaggaaatacta 124
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 agctggatataacctgaatttctccccttgttttatctttcagagtatcaggaaatacta 325

                                                                       
Query: 125 tgtaagccaccaagcatgggaagcaatcatttgtcctacccagctgtggtgcttatgacc 184
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 -gtaagccaccaagcatgggaagcaatcatttgtcctacccagctgtggtgcttatgacc 384

                                                                       
Query: 185 tataacaatggccagaatggtacaatatccttagagatttagtagtagtattcatatctt 244
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 385 tataacaatggccagaatggtacaatacccttagagatttagtagtagtattcatatctt 444

                                                                       
Query: 245 ggtggtcaccaataactaattgttttgacttaaagctcactcaacagaaatcatgcctag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggtggtcaccaataactaattgttttgacttaaagctcactcaacagaaatcatgcctag 504

                                                                       
Query: 305 aactagaaaatgaattcctaaagacataatttacaaatactaaggagaacataaaggcca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aactagaaaatgaattcctaaagacataatttacaaatactaaggagaacataaaggcca 564

                                                                       
Query: 365 atgaaagccagtatgggtttcttcttagaacaaagaatacctgattaaaatgcaagaaag 424
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 565 atgaaagccagtatgggtttcttcttagaaaaaagaatacctgattaaaatgcaagaaag 624

                                                                       
Query: 425 tactacagaaaaaaatagtatctgaatttcagcacagtattttatcatgcatttgtggta 484
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 625 tactacagaaaaaaatagtatctgaatttcagcaaagtattttatcatgcatttgtggta 684

                                                                       
Query: 485 ttgtcaaaaatataaaaacttaaatttgatgtaaggtaacaactgttattattactatta 544
           |||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||
Sbjct: 685 ttgtcaaaaatataaaaacttaaatttgatgtaaggtagcaact--tattattactatta 742

                                                                       
Query: 545 gtaattgtaagtaaaatatatattaattggttaaagtaagttaaaggccaactagaaaat 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gtaattgtaagtaaaatatatattaattggttaaagtaagttaaaggccaactagaaaat 802

                                                                       
Query: 605 tatttt-cttgcattatttaacagggtatctctctccttggtccaataacaaatgtcttg 663
           |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 803 tatttttcttgcattatttaacaaggtatctctctccttggtccaataacaaatgtcttg 862

                      
Query: 664 tgattgataag 674
           |||||||||||
Sbjct: 863 tgattgataag 873


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1073
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1063
Effective search space:   705832
Effective search space used:   705832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)