Query= MSMg01no177_a02.b1 MSMg01no177_a02.b1 CHROMAT_FILE:
MSMg01no177_a02.b1 PHD_FILE: MSMg01no177_a02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:28 2005
(533 letters)
>mm_chr18_46544770_46545702
Length = 933
Score = 572 bits (296), Expect = e-167
Identities = 311/318 (97%), Gaps = 5/318 (1%)
Strand = Plus / Minus
Query: 216 ggatctctgagttctgagttcaaggtcagcctggtctacagaatgagttccaggacagct 275
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 933 ggatctctgagttctgagttcaaggccagcctggtctacagagtgagttccaggacagct 874
Query: 276 aaggctacagagaaactctgtctcaaacagacagacaaacaacaaacaaacaaaatcccc 335
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 873 aaggctacagagaaactctgtctcaaacagacagacaaac----aacaaacaaaatcccc 818
Query: 336 catcttcactgtttcttcctcttagtacttttccatccactgattccccctgccttgctt 395
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 817 catcttcactgtttcttcctcttagtacttttccatccactga-tccccctgccttgctt 759
Query: 396 tctggctataaattctagttgttctatgtggcagatggctcttttctttactgcagtagg 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 tctggctataaattctagttgttctatgtggcagatggctcttttctttactgcagtagg 699
Query: 456 tactgagtaaactctgcctttattgtcttcagtgtctagctttgttttgctgggtactct 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 tactgagtaaactctgcctttattgtcttcagtgtctagctttgttttgctgggtactct 639
Query: 516 ctgacacggagacagcag 533
||||||||||||||||||
Sbjct: 638 ctgacacggagacagcag 621
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space: 482729
Effective search space used: 482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no177_a02.g1 MSMg01no177_a02.g1 CHROMAT_FILE:
MSMg01no177_a02.g1 PHD_FILE: MSMg01no177_a02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:28 2005
(278 letters)
>mm_chr18_46386787_46387464
Length = 678
Score = 536 bits (277), Expect = e-157
Identities = 277/277 (100%)
Strand = Plus / Plus
Query: 1 tcaccaggggaaaaaggcttagttctataggggctctgcactgctgggttttcagagtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaccaggggaaaaaggcttagttctataggggctctgcactgctgggttttcagagtct 260
Query: 61 caaggctttttgaaagttacttggtaccagtagggggactacactaaggccagttttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaggctttttgaaagttacttggtaccagtagggggactacactaaggccagttttctt 320
Query: 121 ggcagggcattcatcttacattcagtggtccggtttctgtgagaacatgaaagggctttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcagggcattcatcttacattcagtggtccggtttctgtgagaacatgaaagggctttg 380
Query: 181 atatacatgagtagcaaactcacggtccaaggaatttggctaactcttgcgcctggaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatacatgagtagcaaactcacggtccaaggaatttggctaactcttgcgcctggaagt 440
Query: 241 atgaatggtgaagagaggtttgtgtaggattttctag 277
|||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgaatggtgaagagaggtttgtgtaggattttctag 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 678
Length adjustment: 9
Effective length of query: 269
Effective length of database: 669
Effective search space: 179961
Effective search space used: 179961
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
