CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCGCGG
AATTCATCCAAGTTCCCGGCTAACAAATATAATGCTATTAATATATGAAA
TGATACTAGATCAATCTAGGAAAGGGGGCAGTATGATGGTTAGTTTTATG
TCAACTTGACACAGCCTAGGGTTATTGGTGAAGAGGGAGTCTCACTTGGG
AAAATGCCTCCATAAGGCTAGAGGTTTGGCAACCCCATAGCACATTTTCT
TAATTAGTGACTAATTTAGAAGGGCTCAGCCCACTAAGGGTGGGGCTACC
CCTAGGCTTGTGGCCCTGTGTTCTACTGCAAAGCAGGCTGAGCAAATATG
TGGAGCAAGCAAGTAAGCAGCATCTCCCTGTTTTCTATACCAGCTCCTGC
TTCCAGATTTCATTCCTATTTAAGTTCCCATGCTGACTTTCTACAGTGGG
AGACTATGACATGGTAAGCCAAGAAAACCTAATCCTCCCAAACTGGTAAT
AACTAACTAGGTCAGAGAGACAAGCCTTCCCTCTCCAGTATCATTCACTC
TTTCACATATATTTAACTTGTCTTTCAGTTCCACATACCTTAGCGTTTCC
CTGTAATGCCTCCCACTTTTAGTTAGTTATTAGTTTCTCTTTCTACATTT
TAGCTGTTCTTATCACATATATAAATACTATCTGTCTCTATGTCTTCTAG
TTATTAAAATAAATGTTTTAGCA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAG
AGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAA
ATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGTCTAAGAT
CAAAAATTCAGGTGACAGCAGATGCTGGAGAGGATGTGGAGAAAGAGGAA
CACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAA
TCCGTCTGGCGGTTCCTCAGAAAATTGTACATAGTACTACCGGAGGATCC
AGCAATACCTCTCCTGGGAATATATCCAGAAGATGCCCCAACTGGTAAGA
AGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGA
AGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAAT
GTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAAT
TTATGAAATTCCTAGCCTAATGGATGGACCTGGAGGGCATCATCCTGAGT
GAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGAAAAG
TGTATATTAGCCCAAAACCTAGGATACCCAAGATATAAGATACAATTTCC
TAAACACATGAAACTCATGAAAAATG

Query= MSMg01no179_a10.b1 MSMg01no179_a10.b1 CHROMAT_FILE:
MSMg01no179_a10.b1 PHD_FILE: MSMg01no179_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:56 2005
         (639 letters)



>mm_chr18_86264528_86265566
          Length = 1039

 Score = 1137 bits (588), Expect = 0.0
 Identities = 628/642 (97%), Gaps = 4/642 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctaacaaatataatgctattaatatatgaaatgatactagatcaatctaggaaagggggc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ctaacaaatataatgctattaatatatgaaatgatactagatcaatctaggaaagggggc 258

                                                                       
Query: 61  agtatgatggttagttttatgtcaacttgacacagcctagggttattggtgaagagggag 120
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 259 agtatgatggttagttttatgtcaacttgacacaacctagggttattggtgaagagggag 318

                                                                       
Query: 121 tctcacttgggaaaatgcctccataaggctagaggtttggcaaccccatagcacattttc 180
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 319 tctcacttgggaaaatgcctccataaggctagaggtttgccaaccccatagcacattttc 378

                                                                       
Query: 181 ttaattagtgactaatttagaagggctcagcccactaagggtggggctacccctaggctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttaattagtgactaatttagaagggctcagcccactaagggtggggctacccctaggctt 438

                                                                       
Query: 241 gtggccctgtgttctactgcaaagcaggctgagcaaatatgtggagcaagcaagtaagca 300
           |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gtggtcctgtgttctacagcaaagcaggctgagcaaatatgtggagcaagcaagtaagca 498

                                                                       
Query: 301 gcat--ctccctgttttctataccagctcctgcttccagatttcattcctatttaagttc 358
           ||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 499 gcattcctccctgttttctataccagctcctgcttccagatttcattcctgtttaagttc 558

                                                                       
Query: 359 ccatgctgactttctacagtgggagactatgacatggtaagccaaga-aaacctaatcct 417
           ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 559 ccatgctgactttctacagtgggagactatgacatggtaagccaa-ataaacctaatcct 617

                                                                       
Query: 418 cccaaactggtaataactaactaggtcagagagacaagccttccctctccagtatcattc 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 cccaaactggtaataactaactaggtcagagagacaagccttccctctccagtatcattc 677

                                                                       
Query: 478 actctttcacatatatttaacttgtctttcagttccacataccttagcgtttccctgtaa 537
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 678 actctttcacatatatttaacttgtctttcagttccacataccttagtgtttccctgtaa 737

                                                                       
Query: 538 tgcctcccacttttagttagttattagtttctctttctacattttagctgttcttatcac 597
           |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 738 tgcctcccacttttagtttgttattagtttctctttctacattttagctgttgttatcac 797

                                                     
Query: 598 atatataaatactatctgtctctatgtcttctagttattaaa 639
           ||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 798 atatataaatactctctgtttctatgtcttctagttattaaa 839


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space:   647241
Effective search space used:   647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)