CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATTAACCCCCCGAATGAACAAATAATCAATGTAAGTAGAAAACTC
AGCTTGACCATGGATCAATCTCATTCTCAAACTCTCATTGTAAAGAATGA
GATCTTTCAGAAGTTAAAAAGCTTATTGGCTCAAAACAGCTCAAAGCAGT
CAGCCAATTGTCATGCTGGTCTGCTTATGCGTGAGAGAAGTCAGTCAACA
GATTGATTTTGTGCAACAAAGACAAAACAAGATTGATCTTAGGGGAAGAA
GAGAAAGGGAAATGATGGCTTAAAAAAAAAACAAAAACAGAAATTTGCTC
TGTTGCCTAATTTGGTCTGGAATTCACTACATGCCCCATTCTGGGCCTCA
ACTGGTAGGTAAGCCTCCTAAGTACTTGTGTTACACTGTGACCCACCTTC
CAAGCTTTAATGTTTTACTATTTTTGAAGTAAACTAATGGTCTGAGTATT
GTATGTTTGTTTCCCTCTGGCTGGCTGTCCTCACTACAGACTATAAAGAC
CATACCTTTACAATTCCTCTCTCTTGCGCTCAACGCTCACTCCCTGCAGC
TGAGTCTTTATTCAGTACCTCAGTTTTCTGGTTCCTTCTGTTTCTCCAGA
ACCTAGAGTAAAATGCAATTTCCTACCAGCTCCCAAATTCAGGGGTGACC
ACTTATTGA

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACTTTACATTCTGCTCACTGCCCT
GTTCCTGGTAACCCCCTCCCAAAATCCCTCCCCCATTTCCCTCCCCTTCT
CTGAACGAATGGGTGGCCCGTGGGCATCTCCCCACCCTGGCACATCAAGT
CTTTGCTAGGCTAGGTGCATCCTCTCCACTGAAGCCAGACAGGGCAGCCC
GGCTAGAACATATCCCACAGAGAGGCAACAGCTTTTGCGATAGTCCCTGC
TCCAGGTATTGGGGACCCAAGTGAAGACCAAGCCACCCAGCAGCTGACTT
GGACAGATGCAGAGACCAACGGCAAAACAGTGGATGAAGCTTGGGGACTC
TTACGGAAGAATAGAAGGAAGGATTGCAGGCCAAAGAGTATCCTTGTCAG
CGCGACCAACAGAGTCAACTAACCTGCACCCTTGGGGCCCTCAGAGACTG
AACCACCAACCGAAGAGCATCCACGGGCTGGACCTTGGCTTGTTTCTTTT
AAGAGCTCTGCTTTCCCCAGCTTACAGCGCCATTTATTCTTCTTAATTTT
TCTATACCCCTCACTTAAGTCCTTCTAGATCCTCCCCATCCATTTTTAAA
CTGCAAGTTTTCATTCCATGTGGGTCACATGACTGAAATTGGGCGGAGTC
ACTTATTTTTGT

Query= MSMg01no179_e02.b1 MSMg01no179_e02.b1 CHROMAT_FILE:
MSMg01no179_e02.b1 PHD_FILE: MSMg01no179_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:13 2005
         (494 letters)



>mm_chr18_70548103_70548996
          Length = 894

 Score =  797 bits (412), Expect = 0.0
 Identities = 466/494 (94%), Gaps = 19/494 (3%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcattaacccccc----gaatgaacaaataatcaatgtaagtagaaaactcagctt 60
           |||||||||||    ||    |||||||||||||||||| ||||||||||||||||||||
Sbjct: 205 gaattcattaa----ccaaatgaatgaacaaataatcaacgtaagtagaaaactcagctt 260

                                                                       
Query: 61  gaccatggatcaatctcattctcaaactctcattgtaaagaatgagatctttcagaagtt 120
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 gaccatggatcaatctcgttctcaaactctcattgtaaagaatgagatctttcggaagtt 320

                                                                       
Query: 121 aaaaagcttattggctcaaaacagctcaaagcagtcagccaattgtcatgctggtctgct 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaagcttattggcgcaaaacagctcaaagcagtcagccaattgtcatgctggtctgct 380

                                                                       
Query: 181 tatgcgtgagagaagtcagtcaacagattgattttgtgcaacaaagacaaaacaagattg 240
           |||| |||         ||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 381 tatgtgtg---------agtcaacagattgattttgtgtaacaaagacaaaacgagattg 431

                                                                       
Query: 241 atcttaggggaagaagagaaagggaaatgatggcttaaaaaaaaaacaaaaacagaaatt 300
           |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 432 atcttaggggaagaagagaaagggaaatgatggcttaaaaaaaaaac--aaacagaaatt 489

                                                                       
Query: 301 tgctctgttgcctaatttggtctggaattcactacatgccccattctgggcctcaactgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tgctctgttgcctaatttggtctggaattcactacatgccccattctgggcctcaactgg 549

                                                                       
Query: 361 taggtaagcctcctaagtacttgtgttacactgtgacccaccttccaagctttaatgttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 taggtaagcctcctaagtacttgtgttacactgtgacccaccttccaagctttaatgttt 609

                                                                       
Query: 421 tactatttttgaagtaaactaatggtctgagtattgtatgtttgtttccctctggctggc 480
           ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 610 tactatttttgaagtaaactaattgtctgagtattgtatgtttgtttccctctgtctggc 669

                         
Query: 481 tgtcctcactacag 494
           ||||||||||||||
Sbjct: 670 tgtcctcactacag 683


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space:   427856
Effective search space used:   427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)