Query= MSMg01no180_l02.b1 MSMg01no180_l02.b1 CHROMAT_FILE:
MSMg01no180_l02.b1 PHD_FILE: MSMg01no180_l02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:00 2005
(600 letters)
>mm_chr18_51643481_51644481
Length = 1001
Score = 1046 bits (541), Expect = 0.0
Identities = 568/577 (98%), Gaps = 1/577 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaatccaggcagcacaatgtggga-gaacatgacagagaccaacattccttcat 63
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 205 gaattcaaatccaggcagcacaatgtgggaggaacatgacagagaccagcattccttcat 264
Query: 64 gctctgtagtgatgggcagaaaaggatgcccacagacctgcctctgccccatagcacaaa 123
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 265 gctctgtagtgacgggcagaaaaggaagcccacagacctgcctctgccccatagcacaaa 324
Query: 124 taggccttagatacacagagctcagcctatactacacagcagagaatgggaggaggaaga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taggccttagatacacagagctcagcctatactacacagcagagaatgggaggaggaaga 384
Query: 184 cagacagagacctgcacattgccatgcaactcccaacagtcttcccttccagtgcacagc 243
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagacaaagacctgcacattgccatgcaactcccaacagtcttcccttccagtgcacagc 444
Query: 244 ataggcaggccattagacacctgcatctcagaagatgttgtccaccagctgcctgaccat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ataggcaggccattagacacctgcatctcagaagatgttgtccaccagctgcctgaccat 504
Query: 304 tgggaaccacatgggcaaagaggtgatgccgtattctttgccacctccagtagccaggaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgggaaccacatgggcaaagaggtgatgccgtattctttgccacctccagtagccaggaa 564
Query: 364 agctgcccacaagcttttaagcacaagagagctacccactggatcatgatcatgggagag 423
| ||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 565 atctgtccacaagcttttgagcacaagagagttacccactggatcatgatcatgggagag 624
Query: 424 ctagttctgcccctcaccagctatagcactctggggagcaggccttgcacctagcctgga 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctagttctgcccctcaccagctatagcactctggggagcaggccttgcacctagcctgga 684
Query: 484 cagcacagcaaagctgaccctggtggtaggggcacaggtattctggccccaaagatgaac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cagcacagcaaagctgaccctggtggtaggggcacaggtattctggccccaaagatgaac 744
Query: 544 tgaccttgccacttgacatttatccaccatgatgtgg 580
|||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgaccttgccacttgacatttatccaccatgatgtgg 781
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1001
Length adjustment: 10
Effective length of query: 590
Effective length of database: 991
Effective search space: 584690
Effective search space used: 584690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no180_l02.g1 MSMg01no180_l02.g1 CHROMAT_FILE:
MSMg01no180_l02.g1 PHD_FILE: MSMg01no180_l02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:00 2005
(340 letters)
>mm_chr18_51761872_51762611
Length = 740
Score = 636 bits (329), Expect = 0.0
Identities = 335/337 (99%)
Strand = Plus / Minus
Query: 1 tttgcaatagtaaaagaccagggaaaagaaatgcttgctctggaggtttagtgtttacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tttgcaatagtaaaagaccagggaaaagaaatgcttgctctggaggtttagtgtttacat 478
Query: 61 ggaagagcgttctattctatgtttgctgtggaagacaccagtgccaaatggagaggagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ggaagagcgttctattctatgtttgctgtggaagacaccagtgccaaatggagaggagaa 418
Query: 121 ttcaatgatataggaaagaattgagggcagtgatataaagtaaaatattcttaggagaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ttcaatgatataggaaagaattgagggcagtgatataaagtaaaatattcttaggagaac 358
Query: 181 aacagcacttttgtctccaaataaactattcccagatggaggcccatcgttttgcttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 aacagcacttttgtctccaaataaactattcccagatggaggcccatcgttttgcttctt 298
Query: 241 tgaaaaagtaataaatacgtatcaagttgctataaaatatgtggttcaatgttctcaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 297 tgaaaaagtaataaatacgtatcaagttgctataaaatatgtggttcaacgttctcaaca 238
Query: 301 tttctgctttgttggatgctcagtgatgcatcaagcc 337
|||||||||||||||||| ||||||||||||||||||
Sbjct: 237 tttctgctttgttggatgttcagtgatgcatcaagcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
