Query= MSMg01no184_d05.b1 MSMg01no184_d05.b1 CHROMAT_FILE:
MSMg01no184_d05.b1 PHD_FILE: MSMg01no184_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:28 2005
(314 letters)
>mm_chr18_4974902_4975615
Length = 714
Score = 569 bits (294), Expect = e-166
Identities = 306/310 (98%)
Strand = Plus / Plus
Query: 5 gaattccatggcacttgcttgttagtattacaggtcatctggagatgaagaacagctctg 64
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 205 gaattccatggcacttgcttgttagtattacaggtcacctggagatgaagaacagctctg 264
Query: 65 ggagggctgtgggtaggttattcaaatactccattgtgctacttaaggaactccagcgtc 124
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 265 ggagggctgtgggtaggttattcaaataccccattgtgctgcttaaggaactccagcgtc 324
Query: 125 tgtgtatttggctatccacagggaacatggaaccaatctcccaaagatgacctggccacc 184
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtgtgtttggctatccacagggaacatggaaccaatctcccaaagatgacctggccacc 384
Query: 185 actgtcctgttcattgacagatgtccctgagcaggaagcaaggcagtctagaaaagtgtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 actgtcctgttcattgacagatgtccctgagcaggaagcaaggcagtctagaaaagtgtc 444
Query: 245 cctggaaaggagcctgagaggatcttgagaactgagtctggaggaagtgcctgaggccct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cctggaaaggagcctgagaggatcttgagaactgagtctggaggaagtgcctgaggccct 504
Query: 305 gtgaaactct 314
||||||||||
Sbjct: 505 gtgaaactct 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_d05.g1 MSMg01no184_d05.g1 CHROMAT_FILE:
MSMg01no184_d05.g1 PHD_FILE: MSMg01no184_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:28 2005
(643 letters)
>mm_chr18_5020257_5021298
Length = 1042
Score = 1212 bits (627), Expect = 0.0
Identities = 639/643 (99%), Gaps = 1/643 (0%)
Strand = Plus / Minus
Query: 1 tcaggctctaacttactgatccctttgacaattttacatagaagtaaggctcaggccatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 tcaggctctaacttactgatccctttgacaattttacatagaagtaaggctcaggccatt 783
Query: 61 caaggtcacttggagagttaacagaaatggttatccagctgtgggagatggcaaggctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 caaggtcacttggagagttaacagaaatggttatccagctgtgggagatggcaaggctgc 723
Query: 121 agccctaaactcagtactgtaccagcacttctgatagcatccatgttggtatttatacag 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 agccctaaactcagtac-gtaccagcacttctgatagcatccatgttggtatttatacag 664
Query: 181 ttagaggacacttgtgaaaaagacaatatctatgatgacatatttaattacattagtttt 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 663 ttagaggacacttgtgaaaaagacaatatctatgatgacatattcaattacattagtttt 604
Query: 241 tgcactatttaaaaagaggctgctaaaggtagagttgaggccctgtcaagaagagcttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 603 tgcactatttaaaaagaggctgctaaaggtagagttgaggccctgtcaagacgagcttgg 544
Query: 301 ctgagatcctggcagggatggtgaggctgccagatgtcagccccagattgcaacagcagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ctgagatcctggcagggatggtgaggctgccagatgtcagccccagattgcaacagcagt 484
Query: 361 gaaaactagtaagttataaaggcttgaacacacaggcaatcacttcagctccactcaacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gaaaactagtaagttataaaggcttgaacacacaggcaatcacttcagctccactcaacc 424
Query: 421 cactacccagtctcaggatggagaaagggcaatgacacatacaaactcaaagcaaaacta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cactacccagtctcaggatggagaaagggcaatgacacatacaaactcaaagcaaaacta 364
Query: 481 tgtgtgggatgctctcagacgaagactcactgcacagggcaccactgctctctacagccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 363 tgtgtgggatgctctcagacgaagactcactgcacagggcaccactgctctctactgccc 304
Query: 541 actgcagggtagaccaggtagcctctgatgcgtggcagctctctgccatcatgcagtatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 actgcagggtagaccaggtagcctctgatgcgtggcagctctctgccatcatgcagtatt 244
Query: 601 aagggagcacttgcaggggctctctctctgcactgcatgtcta 643
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aagggagcacttgcaggggctctctctctgcactgcatgtcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1042
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1032
Effective search space: 653256
Effective search space used: 653256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
