TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCATTCCAAACTGCTCTAGTCATCACTCTTTTGGTAACAGAATTAAAA
AGTTAAACAGTACTATTTGCAGACTATGAGGTTCAAAGGACACACAGATA
AAAGTTGTAGTATCAAAGGTTTGTGATCTGCAAACAGCTACACTTTGTCA
CTTGGTCCACAGGATGGAGAGCAGCAATTATGATCATCTTCCTTTGAACT
GGGATGCTTTCCCTAGGTGTCTGGAGGGTGCACACTTAGAAGTAAATGCA
GGAAACTTCATGAATGCAGTTTATACTCTCACTGTAAATTAGAGAATTTA
CCTCCAGATCTTTTAATTCTCTAAAACTTTAGTAGGTGGTATTCTTTAAA
AGTTATATTCTGTGAACCACCCAATTTAAGATTCCTAGAAACTATTGATC
AGCCTAATTTTTAAACCATAAAACTCTCTTCACAATTGCAATTGCACTTA
CCCAAAATTAAAATATTGTATACTTAAGTGTCAAAGACTGTACAGATGCC
ATTTAGAGTCCCCATCACTCACAGACTTAGGAGAAAGTGTTGGCACTCGA
TTTAGGCATAGAAGAGGAAAACAGAGAAAAGCACACATGGGCACACCCCA
GATGTGACAGGGTGGTGCTTGTCTGAAAAACAAAATGGTGTGTGCACCCA
GAAGAATATAAATACTCTCTTACATAAGTGGTTGGTTCTCTCCTTTATAA
TCAC

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACTGAATGGCA
GAGAATCACCTGAAAAAAATGTTCAGCATCCTTAATCATCAGGGAAATGC
AAATCAAAACAACCCTGAGATTCCACTTCACACCAGTCAGAATGGCTAAG
ATCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGG
AACACTCCTCCATTGTTGGTGGGATTGCAAACTTGTACAAACATTCTGGA
AATTAGTCTGGTGGTTCCTCAGAAAATTGGACATAGTACTGCCGGAGGAT
CCAGCAATACCTCTTTGGTGCTTCTCCCCCCCCCCCGTTCNAACCGGTAA
GAAGGACACATGCTCCACCCCCCCCATAAAAAAAAAAAATATAATAGCCG
GAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAA
ATGTGGTACATTTTACACAACGGAGTACTACTCAGCTATTATAATTATGA
ATTTATGAAACCCCTAGGTAAATGGATGGAACTGTAGGATATCATTCTTG
AGTGTATTAAGTTTTTCTTACATGAATCCCTTTAAATATTCTCTCTTTGA
TGTAGACGATTATTTTCCCCTGACATCTTAATGTTGATACCGTTCATATT
TACTTCTTGGTTTGACAATTTTTTTAACCTTTTGCACACCTTTAATTTTA
TCTTATCATATCTTTACTCTTTCTTA

Query= MSMg01no186_i19.b1 MSMg01no186_i19.b1 CHROMAT_FILE:
MSMg01no186_i19.b1 PHD_FILE: MSMg01no186_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:34 2005
         (583 letters)



>mm_chr18_48535612_48536594
          Length = 983

 Score = 1058 bits (547), Expect = 0.0
 Identities = 571/579 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcattccaaactgctctagtcatcactcttttggtaacagaattaaaaagttaaac 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattccaaacagctctagtcatcactcttttggtaacagaattaaaaagttaaac 264

                                                                       
Query: 65  agtactatttgcagactatgaggttcaaaggacacacagataaaagttgtagtatcaaag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agtactatttgcagactatgaggttcaaaggacacacagataaaagttgtagtatcaaag 324

                                                                       
Query: 125 gtttgtgatctgcaaacagctacactttgtcacttggtccacaggatggagagcagcaat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtttgtgatctgcaaacagctacactttgtcacttggtccacaggatggagagcagcaat 384

                                                                       
Query: 185 tatgatcatcttcctttgaactgggatgctttccctaggtgtctggagggtgcacactta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tatgatcatcttcctttgaactgggatgctttccctaggtgtctggagggtgcacactta 444

                                                                       
Query: 245 gaagtaaatgcaggaaacttcatgaatgcagtttatactctcactgtaaattagagaatt 304
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 445 gaagtaaatgcaggaaacttcatgaatgcagtttatactttcactgtaaattagagaatt 504

                                                                       
Query: 305 tacctccagatcttttaattctctaaaactttagtaggtggtattctttaaaagttatat 364
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tacctccagatctttaaattctctaaaactttagtaggtggtattctttaaaagttatat 564

                                                                       
Query: 365 tctgtgaaccacccaatttaagattcctagaaactattgatcagcctaatttttaaacca 424
           |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tctgtgaaccagtcaatttaagattcctagaaactattgatcagcctaatttttaaacca 624

                                                                       
Query: 425 taaaactctcttcacaattgcaattgcacttacccaaaattaaaatattgtatacttaag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 625 taaaactctcttcacaattgcaattgcacttacccaaaattaaaatattatatacttaag 684

                                                                       
Query: 485 tgtcaaagactgtacagatgccatttagagtccccatcactcacagacttaggagaaagt 544
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 685 tgtcaaagactgtacagatgccatttagagtccccatcactcccagacttaggagaaagt 744

                                                  
Query: 545 gttggcactcgatttaggcatagaagaggaaaacagaga 583
           ||||||||| |||||||||||||||||||||||||||||
Sbjct: 745 gttggcacttgatttaggcatagaagaggaaaacagaga 783


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space:   557529
Effective search space used:   557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)