Query= MSMg01no187_l03.b1 MSMg01no187_l03.b1 CHROMAT_FILE:
MSMg01no187_l03.b1 PHD_FILE: MSMg01no187_l03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:05 2005
(316 letters)
>mm_chr18_7519525_7520240
Length = 716
Score = 542 bits (280), Expect = e-158
Identities = 304/312 (97%)
Strand = Plus / Plus
Query: 5 gaattcacttgtctccttgactggactcagaggtcctgaatcactcatagaacagtaata 64
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 205 gaattcacttgtctccttgactggactcagagatcctgaatctctcatagaacagtaata 264
Query: 65 gttctagatgtgcccatggaggtgcagctgggaggaacacacatttgaatcagagactga 124
||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 265 gttctagatgtgcccatgggggtgcagctgggaggagcacacatttgaatcagagactga 324
Query: 125 gtaaagacaaacctaccacaaacaacatgttcagacacgatcacagggagagagacaact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtaaagacaaacctaccacaaacaacatgttcagacacgatcacagggagagagacaact 384
Query: 185 ccccttctatctgaactgagaaactcactttctgattccctcatggcaaacatggtagct 244
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 385 ccccttctatctgaactgagaaactcactttccgattccctcatggcaaacatggtagct 444
Query: 245 cccagctctctggactccagactccagtcttataccattatccaatccttaccacagtgc 304
||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 445 cccagctctctggactccagactccagtcttataccagcacccaatccttaccacagtgc 504
Query: 305 tagttctctctc 316
||||||||||||
Sbjct: 505 tagttctctctc 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no187_l03.g1 MSMg01no187_l03.g1 CHROMAT_FILE:
MSMg01no187_l03.g1 PHD_FILE: MSMg01no187_l03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:05 2005
(291 letters)
>mm_chr18_7587201_7587889
Length = 689
Score = 520 bits (269), Expect = e-152
Identities = 285/291 (97%), Gaps = 2/291 (0%)
Strand = Plus / Minus
Query: 1 agagtctcatgacttgccactctgtcaaggtgctttggataccatgttaccaagcagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 430 agagtctcatgacttgccactctgtcaaggtgctttggataccatgttaggaagcagcat 371
Query: 61 cagagaaggggaaattttgaatgttttacttataaaatagagttttgtttgaactgtcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cagagaaggggaaattttgaatgttttacttataaaatagagttttgtttgaactgtcat 311
Query: 121 tggcaattgagactgtagggggagatagctcctatccatgggatgaatgaatcctagagt 180
||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 310 tggcaattgagactgta--gggagatagctcctctccatgggatgaatgcatcctagagt 253
Query: 181 ttgaggtcaggtgcatcaccccggaaggcagtggctgcagtacttggacagctgtggtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ttgaggtcaggtgcatcaccccggaaggcagtggctgcagtacttggacagctgtggtgg 193
Query: 241 tttgaaagagaatggcccccagagctcatatttgaatgcctggtccccagt 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tttgaaagagaatggcccccagagctcatatttgaatgcctggtccccagt 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 689
Length adjustment: 9
Effective length of query: 282
Effective length of database: 680
Effective search space: 191760
Effective search space used: 191760
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
