Query= MSMg01no187_m17.b1 MSMg01no187_m17.b1 CHROMAT_FILE:
MSMg01no187_m17.b1 PHD_FILE: MSMg01no187_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:13 2005
(311 letters)
>mm_chr18_68854155_68854866
Length = 712
Score = 549 bits (284), Expect = e-161
Identities = 302/308 (98%), Gaps = 1/308 (0%)
Strand = Plus / Minus
Query: 5 gaattcttctgc-aaataataactataatcttgggcttttgatcttaatgaaaaagaaag 63
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gaattcttctgcaaaataataactataatcttgggcttttgatcttaatgaaaaagaaag 453
Query: 64 tccattcgtttcctgaatcccagttaagttttcaatgactttctggtcattacttagccc 123
|||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tccatttgtttcctgaatcctagttaagttttcaatgactttctggtcattacttagccc 393
Query: 124 gacttggatcggggtgccgattgttctttaatttactaaaatgatgtatttcctctgtat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gacttggatcggggtgccgattgttctttaatttactaaaatgatgtatttcctctgtat 333
Query: 184 gagctcaaactaaaatcgcatccaacatcatttttccagcactacttgcgtcaaatgtta 243
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 332 gagctcaaactaaaatcacatccaacatcatttttccagcactacttgtgtcaaatgtta 273
Query: 244 tctgttatttcctcctggggactctctccatgtctcggtttcctggatctttgatggtga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 272 tctgttatttcctcctggggactctctccatgtctcggtttcctggatctttgatcgtga 213
Query: 304 tatacaat 311
||||||||
Sbjct: 212 tatacaat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 712
Length adjustment: 9
Effective length of query: 302
Effective length of database: 703
Effective search space: 212306
Effective search space used: 212306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no187_m17.g1 MSMg01no187_m17.g1 CHROMAT_FILE:
MSMg01no187_m17.g1 PHD_FILE: MSMg01no187_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:13 2005
(286 letters)
>mm_chr18_68759482_68760164
Length = 683
Score = 491 bits (254), Expect = e-143
Identities = 276/284 (97%), Gaps = 3/284 (1%)
Strand = Plus / Plus
Query: 1 tttacccaatgctgagctaaacactgagcaattcagagacaagaggaccacaactgccca 60
||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 201 tttactcaatgctgagctaaacactgagcaattcagagacaagagga-caaaactgccca 259
Query: 61 gaacatttgactatgtgaccaatagctcactgtgggtccaaaataagccagagtcagact 120
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 260 gaacagttgactatgtgaccaatagttcactgtgggtccaaaataagccagagtcagact 319
Query: 121 gtagaagggatgtgtgtctacagggtatgtgctcaaaacagatccgtaatagaaaaaaaa 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 320 gtagaagggatgtgtgtctacagggtatgtgctcaaaacagatacgtaatagaaaaaaaa 379
Query: 181 aactagatttgatgaaaacatggccaagatgagccatgaaaagagggtcttctgagttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 --ctagatttgatgaaaacatggccaagatgagccatgaaaagagggtcttctgagttgc 437
Query: 241 cttttctttctgtctttctgaggggagctttctaaggaagtgta 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cttttctttctgtctttctgaggggagctttctaaggaagtgta 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 683
Length adjustment: 9
Effective length of query: 277
Effective length of database: 674
Effective search space: 186698
Effective search space used: 186698
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
