Query= MSMg01no188_j07.b1 MSMg01no188_j07.b1 CHROMAT_FILE:
MSMg01no188_j07.b1 PHD_FILE: MSMg01no188_j07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:16 2005
(318 letters)
>mm_chr18_70288040_70288757
Length = 718
Score = 569 bits (294), Expect = e-166
Identities = 309/314 (98%), Gaps = 1/314 (0%)
Strand = Plus / Plus
Query: 5 gaattctcactctattctgtatacatgaatcacattgtagacaataagtctgctcaatag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 205 gaattctcactctattctgtatacatgaatcacattgtagacaataagtctgcacaatag 264
Query: 65 tgtgtcatttaaaattaaaacaacatgctgaaaacacagtttcattgttcacagcacttg 124
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 265 tgtgtcatttaaaattaaaacaacatgctgaaaacacagtttcattgttcgcagcacttg 324
Query: 125 cactctttttttttttttggaggtggggttcgagacagggtttttctgtatagccctggc 184
||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 325 cactc-ttttttttttttgaagggggggttcgagacagggtttttctgtatagccctggc 383
Query: 185 tgtcctggaactcactctgtagaccaggctggcctcgaactcagaaatccgcctgcctct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgtcctggaactcactctgtagaccaggctggcctcgaactcagaaatccgcctgcctct 443
Query: 245 gcctcccgagtgctgggattaaaggcatgtgacaccacgcctggcgcccaaccagctcat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gcctcccgagtgctgggattaaaggcatgtgacaccacgcctggcgcccaaccagctcat 503
Query: 305 aaacacctatgact 318
||||||||||||||
Sbjct: 504 aaacacctatgact 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no188_j07.g1 MSMg01no188_j07.g1 CHROMAT_FILE:
MSMg01no188_j07.g1 PHD_FILE: MSMg01no188_j07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:16 2005
(284 letters)
>mm_chr18_70365374_70366058
Length = 685
Score = 536 bits (277), Expect = e-157
Identities = 283/285 (99%), Gaps = 1/285 (0%)
Strand = Plus / Minus
Query: 1 tcatgtggtagtgtttcctagaaaaagcaaccaggaaattaaagcaattactcatatggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tcatgtggtagtgtttcctagaaaaagcaaccaggaaattaaagcaattactcatatggt 426
Query: 61 tcatttttaaaagaaaa-atattccatgttaattttctgataattgaagagatgaagagg 119
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 425 tcatttttaaaagaaaatatattccatgttaattttccgataattgaagagatgaagagg 366
Query: 120 ataaaggaagtgggggtggtgatcgtgtttactttaatgatccatctaattgctttcatt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ataaaggaagtgggggtggtgatcgtgtttactttaatgatccatctaattgctttcatt 306
Query: 180 ctccagtctgtcttgtcaccaatgacacagacagagtgttacgtggggaatgcaggtggc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ctccagtctgtcttgtcaccaatgacacagacagagtgttacgtggggaatgcaggtggc 246
Query: 240 ccacaggtaaacattgtctttctacattctgtggttaatttgaaa 284
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ccacaggtaaacattgtctttctacattctgtggttaatttgaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 685
Length adjustment: 9
Effective length of query: 275
Effective length of database: 676
Effective search space: 185900
Effective search space used: 185900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
