Query= MSMg01no190_d16.b1 MSMg01no190_d16.b1 CHROMAT_FILE:
MSMg01no190_d16.b1 PHD_FILE: MSMg01no190_d16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:24 2005
(330 letters)
>mm_chr18_66572578_66573306
Length = 729
Score = 551 bits (285), Expect = e-161
Identities = 309/317 (97%), Gaps = 1/317 (0%)
Strand = Plus / Minus
Query: 4 ggaattcttctgaaatctttgttatttcttttctataaaggcacagttggtctattgaaa 63
|||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ggaattcttccgaaatctttg-tatttcttttctataaaggcacagttggtctattgaaa 461
Query: 64 actcgttgggtgctgggtatcaagttcaatatcattgcttttagttcttacgagcagata 123
||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 460 actcgttgggtgctggggatcaagttcaatgtcattgcttttagttcttacgagcagaca 401
Query: 124 gaacaagaaaatatgtattatgaaactgtgcatacgtacctatctgtgacagagctagga 183
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gaacaagaaaacatgtattatgaaactgtgcatacgtacctatctgtgacagagctagga 341
Query: 184 tatacatgtgtgaacccccatctgatatctgcctgctcacattggtatcatctttccagt 243
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tatacgtgtgtgaacccccatctgatatctgcctgctcacattggtatcatctttccagt 281
Query: 244 tgccctttaaataaccctctggtacagtgacttattctccgtgtgtgcatgtgtgccaca 303
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 280 tgccctttaaataaccctctggtacagtgacttattctccatgtgtgcatgtgtgccaca 221
Query: 304 gtgtggaagttggaacc 320
|||||||||||||||||
Sbjct: 220 gtgtggaagttggaacc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 729
Length adjustment: 9
Effective length of query: 321
Effective length of database: 720
Effective search space: 231120
Effective search space used: 231120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no190_d16.g1 MSMg01no190_d16.g1 CHROMAT_FILE:
MSMg01no190_d16.g1 PHD_FILE: MSMg01no190_d16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:25 2005
(274 letters)
>mm_chr18_66532383_66533055
Length = 673
Score = 511 bits (264), Expect = e-149
Identities = 270/272 (99%), Gaps = 1/272 (0%)
Strand = Plus / Plus
Query: 1 agtgtataaatcttcagacaggacagacctcggggatctgcctcagctctctagaaggaa 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgtataaatcttcaggcaggacagacctcggggatctgcctcagctctctagaaggaa 260
Query: 61 ccacaaggcaaccaaacgctcaggttcaaggaagatcgcgcaactcaggaggctaacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccacaaggcaaccaaacgctcaggttcaaggaagatcgcgcaactcaggaggctaacaca 320
Query: 121 gctgccccgagaccctctttgtgaggcacaagctctagagctcaacaaatcattttgctg 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctgccc-gagaccctctttgtgaggcacaagctctagagctcaacaaatcattttgctg 379
Query: 181 cctctgtggctgaggaaaaggagtctcacaaagcaaagaggactcagatgtttccagttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cctctgtggctgaggaaaaggagtctcacaaagcaaagaggactcagatgtttccagttg 439
Query: 241 gagatcaaaaggcagctgagtgcctaggaggg 272
||||||||||||||||||||||||||||||||
Sbjct: 440 gagatcaaaaggcagctgagtgcctaggaggg 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 673
Length adjustment: 9
Effective length of query: 265
Effective length of database: 664
Effective search space: 175960
Effective search space used: 175960
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
