Query= MSMg01no191_h23.b1 MSMg01no191_h23.b1 CHROMAT_FILE:
MSMg01no191_h23.b1 PHD_FILE: MSMg01no191_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:07 2005
(314 letters)
>mm_chr18_48586249_48586961
Length = 713
Score = 532 bits (275), Expect = e-155
Identities = 302/311 (97%), Gaps = 3/311 (0%)
Strand = Plus / Plus
Query: 5 gaattccattaggtaacattaaatgatatgttatgatacaagaaaatgcaaactgttaca 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccattacgtaacattaaatgatatgttatgatacaagaaaatgcaaactgttaca 264
Query: 65 tgaatatcattgaaaaaagatatctatttttaggtattaaatattcactaaatatactta 124
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 265 tgaatatcattgaaaaa-gatatctatttttaggtattaaatattcattaaatatactta 323
Query: 125 atatttgcacatatgagatatttaat-tattttattcctaattataatcattaaagtaaa 183
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 324 atatttgcacatataagatatttaatatattttattcctaattataatcattaaagtaaa 383
Query: 184 attatgatgtatagaccatgttaaatatttaatttctacaaaattgaagtagaatgtgct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 384 attatgatgtatagaccatgttaaatatttaatttctacaaaattgaagtagaatatgct 443
Query: 244 gtggtatgaataacgaaatttaattattttttttctttgtctcatttacataacatattg 303
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 444 gtggtatgaataacaaaatttaattattttttt-ctttgtctcatttacataacatattg 502
Query: 304 ctatcaaggaa 314
||||||||||
Sbjct: 503 ttatcaaggaa 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 713
Length adjustment: 9
Effective length of query: 305
Effective length of database: 704
Effective search space: 214720
Effective search space used: 214720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_h23.g1 MSMg01no191_h23.g1 CHROMAT_FILE:
MSMg01no191_h23.g1 PHD_FILE: MSMg01no191_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:07 2005
(284 letters)
>mm_chr18_48733545_48734228
Length = 684
Score = 534 bits (276), Expect = e-156
Identities = 282/284 (99%)
Strand = Plus / Minus
Query: 1 atgaaattcctaagcaaatggatggacctggagggcatcatcctgaccgaggtaacccaa 60
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 639 atgaaattcctaagcaaatggatggacctggagggcatcatcctgagtgaggtaacccaa 580
Query: 61 tcacaaaagaactcacatgatatgtactcactgataagtggatttgcaaaacacatgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tcacaaaagaactcacatgatatgtactcactgataagtggatttgcaaaacacatgaaa 520
Query: 121 ctcaaaaagaacgaagaccaaagtatgtgatattttaagacagtgagttataaaaaaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ctcaaaaagaacgaagaccaaagtatgtgatattttaagacagtgagttataaaaaaatc 460
Query: 181 acattattaagaggaacaagatcaatttatttgctgtgtataaaaatattatattgccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 acattattaagaggaacaagatcaatttatttgctgtgtataaaaatattatattgccca 400
Query: 241 gttgggaaaaaagttttatgttgttatgaattatgaatgcccta 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gttgggaaaaaagttttatgttgttatgaattatgaatgcccta 356
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
